Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq80 221 1e-52 seq9 102 6e-17 >seq80 Length=87281 Score = 221 bits (244), Expect = 1e-52 Identities = 581/875 (66%), Gaps = 20/875 (2%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||| | || || ||||| | || || ||||||||||| |||||| | |||||| Sbjct 45101 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 45042 Query 43790 ACTAAAGACTTAGCACATT-GGATTGCATTAAAACCACAAGAAAAACAT---TTTATATC 43845 | || ||| | ||| ||| || | ||| || | ||| | ||||| || Sbjct 45041 AGCAAGGACCTTCATGATTGGGAAAACAAGATGACC-GAAAACGAACGTTTCTTTATCTC 44983 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGTC 43904 | |||||||| || ||||||| || || || || |||||||| |||||| | Sbjct 44982 TCGCGTTTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAA 44923 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCA 43964 |||| | | ||||| | | || ||||| |||||| ||||| |||||||| | Sbjct 44922 CTTTTGTG-ATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGA 44864 Query 43965 TAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGC 44024 | ||||||||||| | |||| ||||||||| |||| || || || |||||||| | Sbjct 44863 TTGAAAATATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGACAACC 44804 Query 44025 ACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAG 44084 | ||||| | | ||| ||| || || || | ||| || || || || | Sbjct 44803 AAGAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTG 44744 Query 44085 ACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTG 44144 | |||||| | |||||||| || || | |||||||| ||||| ||||| || |||| Sbjct 44743 ATTGGGCCTTCAAATGGATTTCCTCTAACGGTTCTTTTGCTGAACGTCTTGTTGCCTTTG 44684 Query 44145 CAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAAC 44204 | | ||| ||||| || ||||| || || || ||||| |||| |||||| | || |||| Sbjct 44683 CTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAAAAAC 44624 Query 44205 GAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTAC 44264 | ||| ||||||| || ||||| || ||||| || || ||||||||||||| | | Sbjct 44623 GTGGTCTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTC 44564 Query 44265 ATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTC-ATGTAAG 44323 || || |||||||| | ||| || |||| | ||||| | | | ||| Sbjct 44563 ATACTGACTTTGCTTGTCTTTTATTTACCCATCTTCG------TAAGCGTCCTAGCCAAG 44510 Query 44324 A--CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAG 44381 | | | ||||| | | || || || | || |||||||||||| |||| | Sbjct 44509 AACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATG 44450 Query 44382 CATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACA 44441 | | || || | | || || ||||| |||||| || || || |||| | Sbjct 44449 CTCTTCCCGTCGCTCTCATCGGCATGAACTCTGCCTTGATGTGTCAGTACATCGAATTCG 44390 Query 44442 TTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG-TACAAAACCCG 44500 |||| |||||| | | | | || || | ||| || || || | ||| || || Sbjct 44389 TTGCTGATCGTCTCATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTAC-CAATCCA 44331 Query 44501 TTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTT 44560 ||||| |||||||| | || || | ||||||| || ||||| |||||||| || || Sbjct 44330 TTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTC 44271 Query 44561 GGAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595 || ||||| || || |||||| |||||| Sbjct 44270 TCTGATTATCAACGTGCTGGTGTCATG--AACAAG 44238 >seq9 Length=217876 Score = 102 bits (112), Expect = 6e-17 Identities = 381/592 (64%), Gaps = 33/592 (6%) Strand=Plus/Plus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATG- 40920 ||||||||||||||| || || || |||||||| | | |||| ||||| || ||||| | Sbjct 8674 TGAAGGTGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGT 8733 Query 40921 ACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 | | || | |||||||||| |||| || ||||||||||| || || || | Sbjct 8734 TGATTGTG-ATACTGATTATACAGGGCAAGGCATTGATCAATTACAACAAGTGATCGACA 8792 Query 40981 CGATTAAATCCGATC---CCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037 | || ||| | ||| | ||| || || || || ||| || |||||||| | | Sbjct 8793 CTATAAAAAACAATCCTACTGATCGCAGA---ATCATTCTGTCAGCATGGAACCCTGCAG 8849 Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA--- 41094 | | | | | ||||| || || ||||||||| || ||||| ||||| || | | Sbjct 8850 ATATTCCTATCATGGCTTTACCGCCTTGTCATGCCTTTTGTCAATTTTATGTATCTAATC 8909 Query 41095 ---------ATGGTGAAC---------TGTCATGTCAATTGTATCAAAGATCAGGTGACA 41136 |||| | || |||| ||| | |||||| | || |||| | Sbjct 8910 CACCTCAGGATGGCGGACGTGCCAAGTTGTCTTGTGTGCTTTATCAACGTTCTTGTGATA 8969 Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196 ||||||| || || || || || || || |||||| || | || |||||||| | Sbjct 8970 TGGGACTGGGTGTTCCTTTCAATATTGCCTCTTATGCACTTTTGACACGCATGATTGCGC 9029 Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACA 41256 | || || || | | ||||||||||| | || || | || ||| |||| |||| Sbjct 9030 ATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTTATG 9089 Query 41257 TTAATCACATAGA-GCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACG 41315 | |||| | || || |||| |||| | ||| |||| | || || || || Sbjct 9090 TGGATCATCTTGACGCACTTAA-GCAACAGATTCAACGTGAACCCAAGCCTTTCCCTACT 9148 Query 41316 CTACTTATTAAACGCGCTGTTGAAAACATTGATGATTTTTGCATCGATGATTTTGTCGTT 41375 || || || || || || | || |||||||| | || |||||||| ||| Sbjct 9149 TTAAAAATCAACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTTTGT-GTT 9207 Query 41376 TGCG-ATTACAATCCGTACCCTAAAATCCACATGGACATGTCTGTATGATAA 41426 | | | |||||||| || |||||| | ||| | |||||||| | |||| Sbjct 9208 AGAGAACTACAATCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAA 9259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453117822975