Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq15 178 1e-39 seq57 111 1e-19 seq118 109 5e-19 seq10 89.7 4e-13 >seq15 Length=177086 Score = 178 bits (196), Expect = 1e-39 Identities = 328/474 (69%), Gaps = 13/474 (3%) Strand=Plus/Minus Query 131613 TGGGACACATTAGCGACCA--CACG-CCGT-TCTGTTCAACTCGCTTCATAAACAAATCC 131668 |||| || | ||| ||||| ||| |||| |||| || |||| ||| || | ||| Sbjct 93156 TGGGGCAAAATAGAGACCAATCACCACCGTCTCTG----ACACGCTGCATGAAAAGATCA 93101 Query 131669 GGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAAttttt 131728 || ||||| | || || |||||||| | |||| | | || ||| |||| | ||||| Sbjct 93100 GGAACCCAGAGAGCATAGAACAGATCACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTT 93041 Query 131729 ttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCG 131788 ||| | ||||||| |||||||| ||||||||||||||||| |||| ||| | |||| Sbjct 93040 CGCAAGTCTAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCG 92981 Query 131789 CCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACGCGCAAC 131845 || ||| ||||||||||||| |||| |||| || | |||||| | || || | | Sbjct 92980 CCCGGACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGC 92921 Query 131846 ATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTG 131905 |||||| || ||||||| || || ||||||| |||||| ||| | || | Sbjct 92920 ATGGGCAATAATCCGTTGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGA 92861 Query 131906 ATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCATTTGGT 131964 || ||||||| ||| | |||||||| || || || || |||||| | || || | | Sbjct 92860 ATGTTGTGAATGTTCAAGCCAATACCGCCTGCTGT-CTTGGAGATTTGAGCACAGATTTT 92802 Query 131965 TAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCAAGAGGA 132024 || || | |||||||||||| | || | ||| || || || ||||| || Sbjct 92801 GAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGA 92742 Query 132025 CAACTGTTGGTGAAATGTGCCGGCTGAAAACAATGTGGGGCTGGCGTGTGTAAA 132078 || || | || |||||| || ||| || || || || ||||||||||| Sbjct 92741 CATTTGGGGACGAGGTGTGCCTGCATTAAATAAAGTAGGACTAGCGTGTGTAAA 92688 >seq57 Length=110979 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 |||||||| | ||||| || ||||| || || |||||||| | | | || | |||||| Sbjct 11232 ACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGGGTACGACCATCTTCG 11291 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||| || | |||||||| |||||||| || || | ||| || || || Sbjct 11292 AGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCTTGA 11351 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || || | ||| | | || | |||||| | | || ||||||| ||| || | || Sbjct 11352 ATTTTTTGTTTTACATTGTCGATAGTGTCAGAAGACTCGACTTCTAAAGTAATCGTCTTT 11411 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || |||||||||||||| Sbjct 11412 CCAGTAAGTGTCTTGACAAAGATTTGCAT 11440 >seq118 Length=67844 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || |||||||| ||||| || |||| | | || |||||||| Sbjct 19104 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCG 19045 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||||||| |||||||||| |||||||| || || | ||| || ||||| | Sbjct 19044 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 18985 Query 27159 ATCTT 27163 ||||| Sbjct 18984 ATCTT 18980 >seq10 Length=205532 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || ||||| || |||||||| |||| | || | || || Sbjct 110428 ACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCACTCAAAGTACGACCATCCTCA 110369 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 || |||||||| || | || || | |||||| || || || | ||| || || || Sbjct 110368 AGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTGTCTTGA 110309 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| | || | |||| | | | || | | ||| ||||||| ||| || | ||| Sbjct 110308 ATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATCGTCTTG 110249 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || ||||| || || ||||||||||| Sbjct 110248 CCGGTAAGAGTCTTTACGAAGATTTGCAT 110220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931318561640