Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq15 269 3e-67 seq297 118 1e-21 seq62 91.5 2e-13 >seq15 Length=177086 Score = 269 bits (298), Expect = 3e-67 Identities = 1118/1735 (64%), Gaps = 48/1735 (3%) Strand=Plus/Minus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 || || || ||||| || ||||| | ||| | || ||| | || | |||||| | | Sbjct 94315 CGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTGGTG 94256 Query 110423 AGCTTGGACATCGTTGGACTTT-CCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA 110481 ||||| || ||||| | |||| |||| ||||| |||||||||||||||||| | Sbjct 94255 AGCTTAC-CAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATA 94197 Query 110482 GCGCCCC-CGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGT 110538 ||| || || | || ||||| ||||||| | | || | |||||||| || || Sbjct 94196 -CGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAG--ATTTCCCAGACGGT 94140 Query 110539 GCGATAGAGATTCTTGATATCATCTGGGATATCTGAG-ATATTCTGGATGGAACCCCCCG 110597 ||||| | || | | | ||||| ||| | | ||||| || || || || Sbjct 94139 CTTGTAGAGGTCTTTCAAGTTTTGAGGGATG-CTGGGCACGTTCTGAATAGATCCTCCGT 94081 Query 110598 CCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGA 110657 | || || | || ||||| ||| | ||||||||| || | || ||| Sbjct 94080 CAGCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCA---- 94025 Query 110658 CGAGGTG--CTTG--TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 ||| || | | ||||| || | | ||||||| ||| | | ||| | | Sbjct 94024 CGAAGTAACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAG 93965 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||| |||||||| |||||||| ||| | ||||| | |||||||| || Sbjct 93964 TTGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTA 93905 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| || || | || ||| |||||| | ||| | || || ||||||||| Sbjct 93904 GGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGT 93845 Query 110834 ACATCCCAGTCGTAGTTGA--GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCC 110891 | ||||||| | || | | ||| | || |||| ||||||| | || || | | Sbjct 93844 GCGGCCCAGTCCCAAA-GATTGGTAGGTGTGACATTCC-ACATGTCGTATTGCAGGATAC 93787 Query 110892 CTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCAC 110951 | | ||| | || || ||| ||||||| |||| || | ||||||||| || | Sbjct 93786 CCTTGGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGC 93727 Query 110952 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 111011 | || |||| || || || || |||||||||||||| || |||| || ||||| Sbjct 93726 AAGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGG 93667 Query 111012 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 111071 |||| |||||| |||| || || || || || || | ||||||||||| Sbjct 93666 CTTCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACAC 93607 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAA 111130 | |||||||| ||||| |||| | | || || |||||| || || ||||| || Sbjct 93606 CTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGATAGTAA 93548 Query 111131 TTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTT 111190 || | ||||||| ||| | ||| | || | || ||| || | || || |||||| Sbjct 93547 TTGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTT 93488 Query 111191 TCATAATCAAAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCC 111247 | ||||| | | ||||| ||||| |||| | || || || || || ||| Sbjct 93487 TGGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGTAGAGCAATGGAGGCC 93434 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 || || || ||||| ||||| | || ||| || | |||||||||||| | |||| Sbjct 93433 AAGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTG 93374 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 | ||| ||||| ||||| || | || |||||||| |||| || |||||||| ||| Sbjct 93373 CTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAG 93314 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGC 111426 || ||| | || | || |||||||| |||| | | ||| || | ||| | | | | Sbjct 93313 AGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAGCTTTTGA 93254 Query 111427 GGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 | || | | | | | || | ||| || ||||| ||| ||||| || |||| Sbjct 93253 GCCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAA 93195 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 111546 || |||||| | || | || || || | | || || || |||||||| | Sbjct 93194 TTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATC 93135 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 |||||| || || |||| ||||||||| || |||| ||| || | | || ||||| Sbjct 93134 ACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATC 93075 Query 111607 TCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATAT 111665 | | | | || || || | ||| ||| ||| || || | || | || | Sbjct 93074 ACGAGCTCTGA-TTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGT 93016 Query 111666 CCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTT 111719 | || ||||| || || | || | ||||| | ||| ||||| || ||| Sbjct 93015 CTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCGCCTT 92959 Query 111720 GATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGAT 111778 ||| ||||| || || || ||| || || || ||||| || |||||| || | || Sbjct 92958 GATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAG 92900 Query 111779 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 111838 | ||| || || || ||| ||| | | || | | | || |||| || ||| Sbjct 92899 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 92840 Query 111839 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 111898 ||||| || || ||| |||||||| ||||| | || || |||||||||| | | Sbjct 92839 ATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 92780 Query 111899 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 111958 || || || ||||| ||| || | ||| ||| ||||| || || | ||||| || Sbjct 92779 ATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCT 92720 Query 111959 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTC 112018 ||||| || | || || | ||||| | || | || |||||| || ||||||| Sbjct 92719 GCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTC 92660 Query 112019 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 || | | | |||||| || || ||||| ||||| || || ||||||| || Sbjct 92659 TCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCA 92605 Score = 89.7 bits (98), Expect = 6e-13 Identities = 249/372 (67%), Gaps = 10/372 (3%) Strand=Plus/Plus Query 111717 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 111776 |||| | ||| |||| || ||| | ||||| || | ||||||||||| || |||| | Sbjct 133073 CTTGTGTCACAAAGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATGATGCCATTGG 133132 Query 111777 ATTGACCATTTGTCCCC-CGA-ATACGAGATTTATTGGCTCTCACATCATG-GATGTGCA 111833 | ||| ||||| || ||| ||| ||| | || | | ||| | || ||| Sbjct 133133 AGGTACCGTTTGTTCCTGCGATATAAGAGCCAGA---GC-CACGAATCTTTTGAGCAGCA 133188 Query 111834 TC-CCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATA 111892 | |||| ||| ||||| |||||||||| | |||||| || | ||| | ||||| Sbjct 133189 ACGCCAACACCGCCAGCAGACTTTGAGATACGAGCACACGTGGTGATAGTATCGTAGATG 133248 Query 111893 CCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGT 111952 || | ||| |||||| || | | |||||||||||| |||| || ||| | ||| Sbjct 133249 CCTTCGATACTGTCCTCTTTCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGT 133308 Query 111953 GTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-GGACATCTTGTC 112011 |||||||| ||||| | || ||||| || ||| | || || | | ||||| || Sbjct 133309 GTACCAGCGTTGAACAATGTAGGTGTAGCATGAGT-AAAGTATTTAGATGACATAAGATC 133367 Query 112012 GTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAA 112071 || || ||| | || | ||| | ||||| ||||| || || || ||||||| Sbjct 133368 ATAGGTTCTGAAGGCGCTTTCTAGGTCGTTACCGTGAATGCCAATAGCAACACGCATGAT 133427 Query 112072 CATGTACTGTGG 112083 |||||| || || Sbjct 133428 CATGTATTGAGG 133439 >seq297 Length=22619 Score = 118 bits (130), Expect = 1e-21 Identities = 213/307 (69%), Gaps = 6/307 (2%) Strand=Plus/Plus Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 8981 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 9040 Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 9041 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 9100 Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGT--TTGATGTAAGCTGTGCCACCGA 182674 ||||||| || ||||| || || | || | | || ||| || | || || Sbjct 9101 GACCAAGAATAGCCTTGATATTTTTTATTTCTTCATTCTTCATG--AGTTCAGCATTAGA 9158 Query 182675 AGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACC 182734 | | || || || ||| |||||| |||| ||||| ||||| |||| |||||||| Sbjct 9159 AACATCACGGACGTTCAGCAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACC 9218 Query 182735 AACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGA 182793 ||| || || | ||| | ||| | || | || || |||||||| || || | || | Sbjct 9219 AACTACTGACATACCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTAATGATCA 9277 Query 182794 GAGTACA 182800 ||||||| Sbjct 9278 GAGTACA 9284 >seq62 Length=105713 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 170027 GCAAAGCATAACAGCGAACAAGATTGTTGGGTCATAATCAAGGACATTGTTTATGACCTC 170086 ||||||||||||| | | ||||| ||||| | |||| | | || | || || Sbjct 64062 GCAAAGCATAACAAGCCAGATGATTGCTGGGTTGTTGTCAATGGCCAAGTCTTGGATGTC 64121 Query 170087 ACAAAATTCCTTCCAGATCACCCCGGTGGTAAGAAGGCGATCATGCTCTTTGCTGGCAAA 170146 ||| | |||||||| |||||||| ||||| |||||||| ||| || ||| |||||| Sbjct 64122 ACAGACTTCCTTCCTGATCACCCTGGTGGAAAGAAGGCTATCTTGATCTATGCTGGTCGT 64181 Query 170147 GATGCAACTGAAGAGTTTGATATGCTTCAT 170176 |||||||| |||||||| | ||| | ||| Sbjct 64182 GATGCAACAGAAGAGTTCAACATGATGCAT 64211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027329012000