Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq15 206 3e-48 seq297 118 1e-21 seq80 96.9 4e-15 >seq15 Length=177086 Score = 206 bits (228), Expect = 3e-48 Identities = 877/1372 (64%), Gaps = 34/1372 (2%) Strand=Plus/Minus Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 |||| ||||| || ||||| || |||||| ||| | ||||| | |||||||| || Sbjct 93964 TTGGATGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTA 93905 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307 ||||| || || | || || |||||||| ||| | | ||| ||||||||| Sbjct 93904 GGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGT 93845 Query 118308 GCGTCCCAGTCGTAG---TTG--AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 118362 ||| ||||||| | ||| || | || | | |||||| || | || |||| Sbjct 93844 GCGGCCCAGTCCCAAAGATTGGTAGGTGTGACA-----TTCCACATGTCGTATTGCAGGA 93790 Query 118363 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 118422 |||| | ||| | || || ||| | || || || || || | || ||||| | Sbjct 93789 TACCCTTGGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACT 93730 Query 118423 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCT 118482 || | || || | ||| || || || || |||||||| || || |||| || Sbjct 93729 CGCAAGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCT 93670 Query 118483 TGGCCTCGTCGGAATCAAACGCGA----GTCGGCACAAAATAAATACATCCGCGAGACCT 118538 |||| || ||||| || | || | || || | || | || || | |||| Sbjct 93669 TGGCTTCTGGTGAATCGAATG-GATAACGAAGGGCCATGA-AAGTG--TCGGCTAAACCT 93614 Query 118539 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTCCGAGCGGTCTCCACGGG 118597 || ||||| | ||||| || | ||||||| | || || ||| || || || || Sbjct 93613 TGAACACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGG 93555 Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657 ||| |||| |||| || | | | || | ||| | |||| |||||| || | || || Sbjct 93554 ATAGTAATTGATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTG 93495 Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGA---CATACTTAGGAAGGGCGAT 118714 || |||| | ||||| | | ||||| ||||| |||| |||| || || || Sbjct 93494 CAGTTTTTGGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGTAGAGCAAT 93441 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || |||| ||||| |||| | ||||| | | ||| || | |||||| || || Sbjct 93440 GGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACA 93381 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 || ||| | ||| || || |||||||| | ||||| |||| ||||||| ||||| Sbjct 93380 CAGGTTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATC 93321 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 ||| || || ||| |||| | || ||||||||||| | || | ||| || | ||| | Sbjct 93320 CTTATAGAGTATGAATGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGGCATACCACAG 93261 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 | ||| | || | | |||| || || ||||| ||| ||||| || Sbjct 93260 CTTTTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGC 93201 Query 118955 TTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGA 119014 |||| || |||||| | | || | || || || | || ||||| || ||||| Sbjct 93200 AACAAATTCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGA 93141 Query 119015 CCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAA 119074 ||| | |||||| || || |||| |||||| || || || | |||||| || |||| Sbjct 93140 CCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAA 93081 Query 119075 GAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCAT 119134 ||||| ||| | ||| || | || || ||||| || |||||| | Sbjct 93080 CAGATCACGAGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAA 93021 Query 119135 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGC 119191 || || || ||||| ||||||| ||||| |||| || ||| ||| | ||| | Sbjct 93020 AATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCC 92961 Query 119192 CTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG-AATGATACCATCGG 119250 || | ||||| | || || ||| || ||||| ||||| || ||| || || | || Sbjct 92960 TTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGG 92902 Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310 | | || || || || ||| || | | || | | | ||| |||| || | Sbjct 92901 AGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGC 92842 Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370 ||||||| ||||| ||| |||||||| || || |||| | | ||||| || | Sbjct 92841 CAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTT 92782 Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430 ||||||| || |||| | | || | ||| || |||||||| || | ||||| | Sbjct 92781 CGATCGAATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGC 92722 Query 119431 CAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGG 119490 | || || || | ||| || | ||||| | || | || |||||| || ||| | Sbjct 92721 CTGCATTAAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATG 92662 Query 119491 TCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 119542 |||| | | || ||| || || || |||||||||| || ||||| Sbjct 92661 TCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCAT 92610 >seq297 Length=22619 Score = 118 bits (130), Expect = 1e-21 Identities = 220/323 (68%), Gaps = 0/323 (0%) Strand=Plus/Plus Query 179737 AGGAGCGATGGCCAGAAGTAGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCA 179796 || ||||| || | | | ||| ||| | |||| ||| |||||||| || ||||||||| Sbjct 8962 AGAAGCGAGGGGAACATGGAGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCA 9021 Query 179797 TCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGA 179856 || | ||| ||| ||||| ||||| | |||||||| || | ||| |||| || | Sbjct 9022 TCATGATCTTGATCTGTCATGATCATCAAACGACCATATCGTAACTCATCAACACTTTCA 9081 Query 179857 TAATCCTTACCTTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGAT 179916 || | ||||| || |||||||| | || ||||| || || | |||| || Sbjct 9082 TACTTTTTACCATGCTGAAGACCAAGAATAGCCTTGATATTTTTTATTTCTTCATTCTTC 9141 Query 179917 GTGAGTTGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACA 179976 |||||| || ||| |||| ||||| || || ||||| | ||||| ||| Sbjct 9142 ATGAGTTCAGCATTAGAAACATCACGGACGTTCAGCAGTTTACCACGAATGGGGAAAACA 9201 Query 179977 CCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCA 180036 || |||| ||||||||||| || || | |||| | | || | ||| || |||||| Sbjct 9202 CCATAGTAGTCACGACCAACTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCA 9261 Query 180037 CCCTCCGTCACGATGAGCGTACA 180059 || || || | ||| || ||||| Sbjct 9262 CCTTCTGTAATGATCAGAGTACA 9284 >seq80 Length=87281 Score = 96.9 bits (106), Expect = 4e-15 Identities = 180/262 (69%), Gaps = 7/262 (3%) Strand=Plus/Plus Query 130028 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 130087 || ||||| || ||||| |||| | |||||| ||| || ||| ||||| ||||| Sbjct 44563 TGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAGACCA 44622 Query 130088 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 130147 || || || | ||| || || | | ||| || |||||||||||||| || || ||| Sbjct 44623 CGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCA 44682 Query 130148 GCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCGCC 130207 || || |||| ||||| |||||||| || | | || | || ||| || | ||| Sbjct 44683 GCAAAGGCAACAAGACGTTCAGCAAAAGAACCG---TTAGAGGAAATCCATTTGAAGGCC 44739 Query 130208 CACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTT 130267 || | |||||| ||| |||||| |||| || | || || |||||| | || || Sbjct 44740 CAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAG--CATTTCTT 44797 Query 130268 TCTGATGG--ATCTTTGATGTA 130287 ||| ||| |||||||| || Sbjct 44798 TCTCTTGGTTGTCTTTGATATA 44819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430600388200