Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq15 291 9e-74 seq80 125 8e-24 seq297 100 3e-16 >seq15 Length=177086 Score = 291 bits (322), Expect = 9e-74 Identities = 1114/1726 (65%), Gaps = 30/1726 (2%) Strand=Plus/Plus Query 104232 TGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACAT 104291 || ||||||| || || |||||||| ||||| || |||||| | | | ||||||| Sbjct 92605 TGATCATGCGTGTTGCGATCGGTATCCATGGAACCGATATTGATGCAGCTATTGAGACAT 92664 Query 104292 ACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTA 104351 || || |||||| || | || | ||||| | || || | || ||||| || | Sbjct 92665 ACAACTTGATGTCTGAAAGATACTTTACACACGCTAGTCCTACTTTATTTAATGCAGGCA 92724 Query 104352 CACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACG 104411 |||| | ||||||||||| ||| ||| | || ||| ||||| || || ||| | | Sbjct 92725 CACCTCGTCCCCAAATGTCTTCTTGTTTCTTGCTCACCATGAAGGAAGATTCGATCGAAG 92784 Query 104412 GTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGA 104471 ||||||||| || || | ||||| |||||||| ||| || || |||||||| Sbjct 92785 GTATCTATGAGACGCTCAAAATCTGTGCTCAAATCTCCAAGACAGCAGGCGGTATTGGCT 92844 Query 104472 TGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAG 104531 || |||| || | | | || | | ||| ||| || || || ||| | || Sbjct 92845 TGAACATTCACAACATTCGTGCTAGTGGATCATACATTGCCGGCACCAACGGTTACTCCA 92904 Query 104532 ATGGTATTATT-CCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCT 104590 | || |||||| || ||||| || || || ||| || || || ||||| |||||| Sbjct 92905 ACGG-ATTATTGCCCATGCTCCGTGTTTTCAACAATACGGCTCGTTATGTCGATCAAGGC 92963 Query 104591 GG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATC 104644 || ||||| ||| | ||||| | || | || || ||||| || || || Sbjct 92964 GGTAATAAGCGTCC---GGGCGCATTCGCAATGTACTTGGAACCCTGGCATGCAGACATT 93020 Query 104645 ATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATCT 104703 | || | || ||||| ||| ||| | || || | | || || ||||| Sbjct 93021 TTCACCTTTTTAGACTTGCGAAAAAACTTTGGTAAAGACGAAAT-CAGAGCTCGTGATCT 93079 Query 104704 CTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTG 104763 |||| ||||||||| |||| ||||| |||||| || | || || |||| |||| Sbjct 93080 GTTCTATGCTCTCTGGGTTCCTGATCTTTTCATGCAGCGTGTCAGAGACGGTGGTGATTG 93139 Query 104764 GTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGA 104823 |||||| ||||| || | | || ||||| | || | | |||||| || |||| Sbjct 93140 GTCTCTATTTTGCCCCAATGAAGCTCCTGGATTACATGAAGTCTGGGGTGACGAATTTGT 93199 Query 104824 AGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGA 104883 || || || ||| ||||| ||||| | || | | || | ||| | Sbjct 93200 TGCTCTCTATGAAAAATACGAACGTGAAGGAAGAGCTAGAGAAACAATCAAGGCTCAAAA 93259 Query 104884 TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAA 104943 ||||| | || ||| | || | ||||| |||||||||| |||| ||| || || || Sbjct 93260 GCTGTGGTATGCCATTTTGGAGGCACAAACGGAGACTGGTAATCCATTCATACTCTATAA 93319 Query 104944 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCT 105003 || || |||||| |||||||||||| | || |||||| ||||||| | ||| || Sbjct 93320 GGATGCTTGTAACAGAAAGAGTAATCAGCAAAACTTGGGTACGATCAAGTGCAGCAACCT 93379 Query 105004 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 105063 ||||||||||| | |||| || ||||| ||||| |||||| | || || Sbjct 93380 GTGTACAGAAATTGTTGAATACTCAAGTCCTGATGAAGTCGCTGTCTGTAACTTGGCCTC 93439 Query 105064 AATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCA 105123 || ||||| || | ||||| |||| | ||| || | | ||||| ||||||| || Sbjct 93440 CATTGCTCTACCTACCTATGT-GATCAATAGAGAA--AAGTATGATTTCCAAAAACTGCA 93496 Query 105124 CGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183 ||| ||||| || | |||| | |||| | |||| | ||||||| |||| || || Sbjct 93497 CGATGTTACCAAGGTTATCACTAGAAACTTGAACAAGATCATTGATATCAATTACTATCC 93556 Query 105184 CGTTGAGACTGCTCGTAA-ATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242 || || || || ||| || | |||||| | || |||||| | |||||||| | Sbjct 93557 TGTCATCGAAGC-CGAAAGATCCAACAAGAGACATAGACCGATTGGTTTAGGTGTTCAAG 93615 Query 105243 GTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAA 105302 || | || || ||||| ||| | |||| ||||| ||||| ||| | Sbjct 93616 GTTTAGCCGACACTTTCATGGCCCTTCGTTATCCATTCGATTCACCAGAAGCCAAGCAGT 93675 Query 105303 TCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGG 105362 | || | || ||||| ||||| || || || || | || || || ||||||| Sbjct 93676 TGAACATTCAAATCTTTGAAACCATCTACCATGCTGCCTTGGAAGCCTCTTGCGAGTTGG 93735 Query 105363 CAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGG-GTGCTT 105421 | || |||| || || ||||||| ||| || || | || |||||| | || Sbjct 93736 CTGAAAAGTATGGACCCTACGAAACCTATGAAGGCAGCCCTGTATC-CAAGGGTATCCTG 93794 Query 105422 CAATTTGATATGTGGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGA 105480 |||| || |||| |||| || | ||| | | || | ||||||| || |||||||| Sbjct 93795 CAATACGACATGT-GGAATGTCACACCTACCAATCTTTGGGACTGGGCCGCACTCAAGGA 93853 Query 105481 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTC 105540 | || || | ||| | |||||| ||| || | ||||| ||||| || ||||| Sbjct 93854 AAAGATTGCCAAGCATGGTGTCCGTAACTCTCTGCTGGTTGCTCCTATGCCTACTGCCTC 93913 Query 105541 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCT 105600 ||| | ||||| | ||| |||||||| |||||||| ||||| | ||| | || Sbjct 93914 CACTTCTCAAATGCTCGGTTTCAATGAATGTTTTGAACCTTACACATCCAACTTTTACAC 93973 Query 105601 GAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA-CAAGCATCTCGTGGATGACCTCA 105659 | | ||| | || || | | || ||||| | | | | | ||| || Sbjct 93974 CCGTCGTGTGCTCTCAGGTGAATATCAAATGGTCAATCCTTGGTTACTTCG-TGATCTAG 94032 Query 105660 AAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCA 105719 || || ||||||||| | ||| ||||| || | || || | || || || | Sbjct 94033 TTGATATGGGTCTCTGGAATGACGATGTGAAGAATATGATCATGGCTGACGGAGGATCTA 94092 Query 105720 TTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAA 105779 |||| || | || || | | | || | | ||| || || ||||||| Sbjct 94093 TTCAGAACGTGCCCAGCATCCCTCAAAACTTGAAAGACCTCTACAAGACCGTCTGGGAAA 94152 Query 105780 TCAAGATGAAGG--ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAG 105837 || | || | | ||||||||||||| || ||||||||| | ||||| ||||| Sbjct 94153 TC--TCTCAACGTACTATCATTGACATGGCTGCTGATCGTGGTGCGTATATTGACCAAAG 94210 Query 105838 TCAAAGTATGAATCTCTTCATGG-AAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACA 105896 ||||||| |||| |||| |||| | ||||| || |||||| | ||||||| Sbjct 94211 TCAAAGTTTGAACATCTTTATGGCTGAACCCAACTTTG-GTAAGCTCACCAGTATGCACT 94269 Query 105897 TGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCCG 105942 | || ||||| | ||||| | || || || ||||||||||| || Sbjct 94270 TTTATGGTTGGCAAAAGGGATTAAAGACAGGCATGTATTACCTTCG 94315 Score = 96.9 bits (106), Expect = 4e-15 Identities = 285/429 (66%), Gaps = 13/429 (3%) Strand=Plus/Minus Query 104320 TCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTT 104379 ||| || ||||| || | ||||| ||||||||||| | ||| ||| |||| |||||||| Sbjct 133341 TCATGCTACACCTACATTGTTCAACGCTGGTACACCTAAACCTCAATTGTCTAGTTGCTT 133282 Query 104380 CCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGC 104439 |||| | | || |||||| ||| | || ||||| | ||| | || |||||| Sbjct 133281 CCTTGTTCAAATGAAAGAGGACAGTATCGAAGGCATCTACGATACTATCACCACGTGTGC 133222 Query 104440 GCAAATCTCAAAGTGGGCTGGGGGTATTGG-GATGCACATC-CATGATGTGAGAGCCAAT 104497 | |||||||||| ||||| ||| |||| | ||| || | ||| | | || | Sbjct 133221 TCGTATCTCAAAGTCTGCTGGCGGTGTTGGCGTTGCTGCTCAAAAGATTCGTG-GC---T 133166 Query 104498 AAATCTCGTAT-TCG-GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCG 104555 ||| ||| ||| || ||||| ||| || |||| || ||||||||||| | | Sbjct 133165 CTGGCTCTTATATCGCAGGAACAAACGGTACCTCCAATGGCATCATTCCAATGCTCAGAG 133106 Query 104556 TATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGT---CG-AAAGGGATCTATC 104611 | ||||| | ||| || |||| ||| | |||| || || || || || | || | Sbjct 133105 TCTTTAATGACACTGCTCGCTTTGTGACACAAGGAGGTGGTAAACGCAACGGTAACT-TT 133047 Query 104612 GCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAAC 104671 || ||||| | || || ||||| | || | | || ||| | || ||||| ||| Sbjct 133046 GCTGTCTACATAGAACCTTGGCATGTCGACGTATTCGAATTCTTGGACTTGCGCAAGAAC 132987 Query 104672 CAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTC 104731 | |||| ||||| ||| ||||| | |||| | | ||| | || ||||| Sbjct 132986 AATGGTGCTGAGGAAATGCGCGCACGCGACTTGTTCTTGGGATTATGGGTGCCTGATCTT 132927 Query 104732 TTCATGAAG 104740 ||||||||| Sbjct 132926 TTCATGAAG 132918 Score = 89.7 bits (98), Expect = 6e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 105044 GCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA 105103 ||||| ||||| | || || | || | ||||||| ||| || ||| ||||||||| Sbjct 132459 GCTGTCTGTAATTTAGCTTCTCTTGCGTTACCCAAGTTTGTCAATAGAGAAACAAAGACA 132400 Query 105104 TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTT 105163 ||||||| ||||| || |||||||| || ||| || || || || |||| ||| Sbjct 132399 TTTGATTTCGAAAAGCTTCACGAAGTCACCAAAGTAGTGACACGCAATCTGAACAAGGTT 132340 Query 105164 ATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222 |||||| |||| ||| || ||||| || ||||| || ||| |||||||||| Sbjct 132339 ATTGATGTCAATTATTATCCAGTTGAAGAAGCCCGTAACAGCAACATGCGACACCGTCC 132281 >seq80 Length=87281 Score = 125 bits (138), Expect = 8e-24 Identities = 287/419 (68%), Gaps = 11/419 (3%) Strand=Plus/Minus Query 94529 TGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTGCTG 94588 |||| ||||||||||| || ||||| |||||| ||| || | | | |||||| || Sbjct 44974 TGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTG 44915 Query 94589 ATGAGGTGCA-ATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAAT-GAAAT 94646 |||| || | || | ||||||| | || ||||||| | ||| |||| || |||| Sbjct 44914 ATGAAGTCAAGATTC-CTGAAGCTAAATGTTTCTATGGCTTTCAAA-TCATGATTGAAAA 44857 Query 94647 GGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAA 94706 | || | || || |||||| | || |||| ||||| || || ||||| Sbjct 44856 TATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGACAACCAAGAGAA 44797 Query 94707 GAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGG 94765 | ||||||| || || | || | || ||||| ||| |||||| | ||||||| Sbjct 44796 AGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTAT-CAAGAGAAAGGCTGATTGGG 44738 Query 94766 CTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | | || ||| || | || || |||| |||||||| || || | || ||||| Sbjct 44737 CCTTCAAATGGATTTCCTCTAA--CG-GTTCTTTTGCTGAACGTCTTGTTGCCTTTGCTG 44681 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGA 94884 ||| || ||||||||||||||||||||||| ||| | || | ||||||||| || || Sbjct 44680 CTGTCGAAGGTATCTTCTTCTCTGGTTCCTT-TGCTTCCATCTTTTGGCTCAAAAAACGT 44622 Query 94885 GGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCA 94943 ||||| ||||| ||| | ||| ||| || | |||| |||||| || || || || Sbjct 44621 GGTCTGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCA 44563 >seq297 Length=22619 Score = 100 bits (110), Expect = 3e-16 Identities = 198/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 169160 TTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGA 169219 |||| || ||||||||||| || ||||| || | ||| ||| ||||||||||| | | Sbjct 8992 TTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCATGATCATCAAA 9051 Query 169220 CGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATC 169279 |||||||| || | ||| |||| || ||| | ||||| || |||||||| | || Sbjct 9052 CGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAAGACCAAGAATA 9111 Query 169280 TTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACA 169339 ||||| || || | |||| || |||| | | ||| |||| || || Sbjct 9112 GCCTTGATATTTTTTATTTCTTCATTCTTCATGAGTTCAGCATTAGAAACATCACGGACG 9171 Query 169340 TTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCACGACCAACGACGGAGAGA 169399 ||| || ||||||| ||||| ||||| |||| ||||||||||| || || | | Sbjct 9172 TTCAGCAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAACTACTGACATA 9231 Query 169400 CCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACA 169452 || | | || | ||| || || ||||| || || | ||| || ||||| Sbjct 9232 CCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTAATGATCAGAGTACA 9284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256461997800