Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq15 120 3e-22 seq80 82.4 8e-11 >seq15 Length=177086 Score = 120 bits (132), Expect = 3e-22 Identities = 192/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 79477 ATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCC 79536 ||||| || ||||| || |||| || || ||||| | ||| ||||| ||||| Sbjct 93019 ATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCT 92960 Query 79537 TGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCG 79596 || | ||| || || ||||| ||||||||||| ||||||||||||| | |||| || | Sbjct 92959 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAATCCGTTGGAG 92900 Query 79597 ACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCC 79655 ||||| || ||| || || || || || |||||||| | | | || | || Sbjct 92899 TAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTT-GTGAATGTTCAAGCC 92841 Query 79656 GATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTC 79715 || || || | ||||||||| || || || ||||||||||| ||||| || || Sbjct 92840 AATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTC 92781 Query 79716 GATCGAGTCGTCCTTCATAGCGACCAGGAAGCA 79748 |||||| || |||||||| | || || ||| || Sbjct 92780 GATCGAATCTTCCTTCATGGTGAGCAAGAAACA 92748 >seq80 Length=87281 Score = 82.4 bits (90), Expect = 8e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 59970 TCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTC 60028 || ||||| ||||||| | || ||||| ||| || ||||| |||||||||||||| || Sbjct 44711 TCTTTTGCTGAACGTCTTGTTGCCTTTGC-TGCTGTCGAAGGTATCTTCTTCTCTGGTTC 44653 Query 60029 GTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAA 60088 || | | || || ||||||||||| ||||| || ||||| || ||| ||| ||| Sbjct 44652 CTTTGCTTCCATCTTTTGGCTCAAAAAACGTGGTCTGATGCCCGGTTTGACATTCAGCAA 44593 Query 60089 CGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 || |||| | || || || || || ||| || ||||| Sbjct 44592 TGAATTGATCTGTCGTGATGAAGGTCTTCATACTGACTTTGC 44551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520720346800