Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 >seq9 Length=217876 Score = 109 bits (120), Expect = 5e-19 Identities = 184/261 (70%), Gaps = 14/261 (5%) Strand=Plus/Minus Query 118357 TTGTAGTTTTCCAAAATAAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTT- 118415 |||||||| || || | ||||||||||||||| || || || ||| | || | ||| Sbjct 9219 TTGTAGTTCTCTAACACAAAATCTTCAAACTTGAAATCATCGATAGT----ATCTACTTT 9164 Query 118416 ---GTTTATGGATAGTGTGGGAAACGGGAGAGGCTCCCTTGTGAGT-TGGAGTTTCAGTG 118471 ||| || || || || || || || || | | ||| | || | || |||| Sbjct 9163 ACGGTTGATTTTTAAAGTAGGGAAAGGCTTGGGTTCACGT-TGAATCTGTTGCTTAAGTG 9105 Query 118472 GCTCAATGTGATTCATATAGACATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTG 118531 |||| |||| || ||| ||||| | ||| || ||||||||||||||||||||||| Sbjct 9104 CGTCAAGATGATCCACATAAACATGTGTATCGCCCATTGTATGTATGAATTCACCAGGAT 9045 Query 118532 TAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTG--TAGCTGGCTACATTAAA 118589 ||| |||| | || ||||||||| |||||| || || || ||| | ||| || Sbjct 9044 CAAGATCTGTTACATGCGCAATCATGCGTGTCAA--AAGTGCATAAGAGGCAATATTGAA 8987 Query 118590 AGGAACACCCAGACCCATGTC 118610 |||||||||||| ||||| || Sbjct 8986 AGGAACACCCAGTCCCATATC 8966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414473794395580