Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq80 226 2e-54 >seq80 Length=87281 Score = 226 bits (250), Expect = 2e-54 Identities = 558/838 (67%), Gaps = 14/838 (2%) Strand=Plus/Plus Query 4259 TTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTC 4318 ||| || || || || |||||||| ||||| || || ||||||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 4319 CATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAA 4378 |||||| ||||| ||||| || || ||||| || || | ||||| || | | Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 4379 TCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCT 4438 || ||||| || ||||| || ||||| | ||| | | |||| || || || | Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 4439 CACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATC 4498 || || || || | |||||||| |||||||| || | || ||||| ||| ||||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 4499 TTTTATTTTATCTTTAGATGGTTTATTTACTAAG-TATCCAAACAATAAACACGCAAAAT 4557 || | |||| | | | |||| ||| | ||| || | ||| ||||| | Sbjct 44499 CTTGACGCGTTCTTG-GCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGT 44557 Query 4558 CACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTA 4617 || ||| | |||||| || | | |||| ||| || || || || |||||||| | Sbjct 44558 CAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCA 44617 Query 4618 AACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTA 4677 ||| | ||||| |||||||| || | ||||| || ||||| ||||| || ||||| | Sbjct 44618 GACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGA 44677 Query 4678 CGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTA 4737 | || ||||| || || | || | || || | | || ||||||||| | Sbjct 44678 CAGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCG---TTAGAGGAAATCCATTTGA 44734 Query 4738 ATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTAC 4797 | ||||| | ||| ||| |||| | || || || |||| ||||| ||| | | Sbjct 44735 AGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCAT-- 44792 Query 4798 TTTTTTCAAATGG--GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATG 4855 || |||| ||| ||||| ||||||||||| || | || || || |||| | || Sbjct 44793 TTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTG 44852 Query 4856 TATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTA-CTTGAACTT 4914 |||||||| || || ||||| || || || ||| ||||||| | | |||| |||| Sbjct 44853 AATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTT 44911 Query 4915 CGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACG 4974 | | |||||| ||| || |||||||| || || || || || | ||||| || | Sbjct 44912 CATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGG 44971 Query 4975 CCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031 ||||||| |||| |||||| | ||||| || | | | |||| ||| | | | Sbjct 44972 CCAAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAA 45031 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 || || | ||||| | ||||||| | |||||||| || ||||| ||||| || || Sbjct 45032 GGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 45089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427046503223135