Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq15 423 3e-113 seq80 286 5e-72 >seq15 Length=177086 Score = 423 bits (468), Expect = 3e-113 Identities = 1367/2104 (65%), Gaps = 46/2104 (2%) Strand=Plus/Minus Query 76811 TGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCT 76870 |||||| || || ||||| || || |||| ||| ||| || || || ||||| || Sbjct 94319 TGTACGAAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACT 94260 Query 76871 TGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGAT 76930 || || || | | | || || || ||| || |||| |||||||| || || Sbjct 94259 GGTGAGCTTACCAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAAT 94200 Query 76931 GAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGT 76990 | || || | |||||| ||||| | || || || ||||| |||||||| | || Sbjct 94199 ATACGCACCACGATCAGCAGCCATGTCAATGATAGTACGTTGAGAGATTTCCCAGACGGT 94140 Query 76991 TTTGAAAACTTGTTTGATATCATCTGGAAGGTTTGTA---TTTTGAATGGAACCACCATC 77047 ||| | | | ||| | | | || | | | | || ||||| || || || || Sbjct 94139 CTTGTAGAGGTCTTTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTC 94080 Query 77048 TGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAG 77107 | || || ||||||| | ||| |||||||| | | | || || | | | ||| Sbjct 94079 AGCCATGATCATATTCTTCACATCGTCATTCCAGAGACCCATATCAACTAGATCACGAAG 94020 Query 77108 GAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACT 77167 | |||||| || |||||| |||| || || | || | ||| ||||||| || Sbjct 94019 TAACCAAGGATTGACCATTTGATATTCACCTGAGAGCACACGACGGGTGTAAAAGTTGGA 93960 Query 77168 GGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCAT 77227 || || ||||| | | |||||||| || | ||||||| ||| || ||||| ||||| Sbjct 93959 TGTGTAAGGTTCAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCAT 93900 Query 77228 AGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTT 77287 ||| || |||| | | || | || |||||| | || || || || || Sbjct 93899 AGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGC 93840 Query 77288 CCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACT 77347 ||| |||||||||| | |||| |||| ||| | |||||||| || || || || Sbjct 93839 CCAGTCCCAAAGATTGGTAGGTGTGACATTCCACATGTCGTATTGCAGGATACCCTT--- 93783 Query 77348 AGCATAT---GATCCATT-ATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAAC 77403 | ||| | | | || ||| ||||| || ||||| | ||||||| | || ||| Sbjct 93782 -GGATACAGGGCTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAAG 93724 Query 77404 TCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGAT-CTTGTGCT 77462 |||||||| || | | || || ||||| || || | | || | | |||| ||| Sbjct 93723 AGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTG-GCT 93665 Query 77463 TCAATACTATCAAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCA 77522 || ||| || |||||| | | || || | || ||||| || ||||| || Sbjct 93664 TCTGGTGAATCGAATGGATAACGAAGGGCCATGAAAGTGTCGGCTAAACCTTGAACACCT 93605 Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582 | |||||| |||||||||||||| ||||| ||| ||||| | |||||| ||||| Sbjct 93604 AAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGATAGTAATTG 93545 Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642 || || || || || || | |||||| | || || || || | ||||| | Sbjct 93544 ATATCAATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGG 93485 Query 77643 AAATCAAATCTTCCATCTAT--AACAAACATGTTC--AAAGCTATAGATGCTAGATTACA 77698 |||||| | || | ||||| | || | | || | ||| || || || | ||||| Sbjct 93484 AAATCATACTTTTC-TCTATTGATCACATAGGTAGGTAGAGCAATGGAGGCCAAGTTACA 93426 Query 77699 AACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTT 77758 || || || |||| || | | |||| | || || ||||| || || || || || Sbjct 93425 GACAGCGACTTCATCAGGACTTGAGTATTCAACAATTTCTGTACACAGGTTGCTGCACTT 93366 Query 77759 GATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAA 77818 ||| || |||| ||||| || || |||||| | || || | |||||||| || || || Sbjct 93365 GATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAA 93306 Query 77819 CGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTT-A 77877 ||| | || || || | |||| || | ||| | || || || ||||||| | Sbjct 93305 TGGATTACCAGTCTCCGTTTGTGCCTCCAAAATGG-----CATACCAC---AGCTTTTGA 93254 Query 77878 TCATAGATT-----TGTATCGCCTC--TCTCTTTCATATTGAGTATATAGCCGTTCAAAT 77930 | | |||| | || | | || || | ||| |||| ||| || ||||| Sbjct 93253 GCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAAT 93194 Query 77931 TCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCA 77990 || || ||||| || |||| |||||||| |||||| ||||| | | ||||| ||| Sbjct 93193 TCGTCACCCCAGACTTCATGTAATCCAGGAGCTTCATTGGGGCAAAATAGAGACCAATCA 93134 Query 77991 CCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCT 78050 ||| | || | || || | ||| || |||||||| | ||| |||||| || ||||| Sbjct 93133 CCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAACCCAGAGAGCATAGAACAGATCA 93074 Query 78051 CGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCA 78110 || | ||| ||| || || || || ||| | || | ||| | ||| || Sbjct 93073 CGAGCTCTGATTTCGTCTTTACCAAAGTTTTTTCGCAAGTCTAAAAAGGTGAAAATGTCT 93014 Query 78111 GAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCT 78170 | |||||| ||||| | || ||||| | | || || || |||||||| || ||||| Sbjct 93013 GCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCGCCTTGATCG 92954 Query 78171 ATATATCTGGCGGTGTTATTATAAACTCTCAACATTGG-AATAATACCGTTAGATGTTCC 78229 | ||| | || || || || |||| | | ||| || |||||| ||||| || || Sbjct 92953 ACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAAT-CCGTTGGAGTAACC 92895 Query 78230 ATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCC 78289 || || || | ||| || |||||| || ||||| || |||| | || || || Sbjct 92894 GTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACC 92835 Query 78290 TCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACT 78349 ||||| |||| || ||| |||| || ||| | || || |||||||| || || Sbjct 92834 GCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGA 92775 Query 78350 GTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATT 78409 || ||| ||||| | || | ||||| ||||||||| || || || |||||||| Sbjct 92774 ATCTTCCTTCATGGTGAGCAAGAAACAAGAAGACATTTGGGGACGAGGTGTGCCTGCATT 92715 Query 78410 AAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAAT 78469 |||||| || ||| || || ||||| || ||||||| | | |||||||| ||||| Sbjct 92714 AAATAAAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAAT 92655 Query 78470 AGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529 ||||| || || || | ||| || || | ||| |||||||| | || ||| ||||| Sbjct 92654 AGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATCAAATGTTGAGG 92595 Query 78530 TCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACC 78589 | |||| | |||| | || || | | ||| || || | ||||| ||||| Sbjct 92594 ACGTTCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGGGTTTTGAAACC 92535 Query 78590 AAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA---GTTTATCT 78644 ||| ||||||| ||||| || | || || || ||| |||| || | | | | | Sbjct 92534 AAAGAAGTTGTACTTGAAA--TCACGGTCATAGATGATAGCAGAGTTCAAGCGGTCAGCG 92477 Query 78645 TTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTT 78704 || | || || | | | | || || || || || || || || || | Sbjct 92476 TTATCCATGACGACTTTGTACGTTTCATTA---GAGATCATGGGTGAGTGTTTGCCTGTC 92420 Query 78705 TTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCC 78764 || ||||| ||||| || | || ||||| ||||| | | ||| | ||||| |||||| Sbjct 92419 TTGGGATTCACATAATTGTACAAGTCTTCGATTACTTGAGAAAAGACCTTTTTGGTTTCC 92360 Query 78765 TTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTA 78824 ||||| |||||||| | || || | ||||| | | ||||||||||||||| | || Sbjct 92359 TTGTGAAGATTAGAAATGGCAATGCGCGCAGCCAACAGAGCATAATCAGGATGGCGAGTG 92300 Query 78825 GTACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTA 78884 || | || ||| ||||||| || | |||| | || | |||||| || || | Sbjct 92299 GTCATATAAGCAGCTGTTTCTGCAGCAAGGTTATCGAGTTCAACAGTTGTAACACCTTGG 92240 Query 78885 TATA 78888 |||| Sbjct 92239 TATA 92236 Score = 114 bits (126), Expect = 2e-20 Identities = 534/836 (64%), Gaps = 14/836 (2%) Strand=Plus/Plus Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || |||| |||| | ||||| | ||||||||| || || || || || || |||||||| Sbjct 133090 GCAGTGTCATTAAAGACTCTGAGCATTGGAATGATGCCATTGGAGGTACCGTTTGTTCCT 133149 Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATC 78299 | |||||| ||| | ||||| || | | | || | || || || | Sbjct 133150 GCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGAC 133209 Query 78300 TTAGATATTAGAGCGCAACGTTTCAAT-GTATCGTAGATACCCTCTATACTGTCATCCAT 78358 || || || |||| || ||| || ||||||||||| || || |||||||| || | Sbjct 133210 TTTGAGATACGAGCACA-CGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTTT 133268 Query 78359 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGT 78418 ||| | || ||| || || ||||||| |||| | | | || || || || || ||||| Sbjct 133269 CATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGT 133328 Query 78419 CGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTC 78478 || | ||||| ||||| |||| || | |||| || ||| | || ||| Sbjct 133329 AGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAGGCGCTTTC 133388 Query 78479 TATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAAC 78538 || ||| ||||| || | || |||||||| | ||| | ||||||| |||||| Sbjct 133389 TAGGTCGTTACCGTGAATGCCAATAGCAACACGCATGATCATGTATTGAGGTCGTTCAAC 133448 Query 78539 CGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTT 78598 | || ||||| || || | |||||| ||| || || ||||| ||||| |||| Sbjct 133449 GATTTTGTTATTAATCTTTAGCAAGTAGCTACGTTCTAACGTCTTAAAGCCAAAGAAGTT 133508 Query 78599 GTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTG--GTA 78656 | ||| ||||| || | || || ||| | | ||||| | ||| | | Sbjct 133509 AAAATCAAAATCTCTATCATGGATGATGGCAGCGTCAATCTTATC--AGCATTAGCCATG 133566 Query 78657 ACAATATCCATGACAGTAGTT-GAAATAATAGGAGATCGTACACCATT--TTTAGGATTA 78713 |||| || ||| | | || |||| || || ||| | | || ||| |||| Sbjct 133567 ACAACAT-CATAAAGCTCCTTGGAAACAAGAG--GATTGGGTTGCTTTAGTTTGGGATGT 133623 Query 78714 ACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGA 78773 ||| | | || | | || ||| |||||| | | |||||||| || || Sbjct 133624 TCATGATGGTACAACTTATGGATGACAGAACTAAACTTATCATCGGTTTCCTTTTGAAGG 133683 Query 78774 TTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGT- 78832 || |||| ||| || | ||||| || ||||| |||||||||| | || || || || Sbjct 133684 TTCGATATAGCAATGCGAGCAGCAAGGGTAGCAAAATCAGGATGGTTCGTTGT-CATGTA 133742 Query 78833 GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCC 78892 || ||| | || || | | |||||| || | || || | || | ||| | || Sbjct 133743 CGCAGCTGTCTCGGCGGTGAGGTTATCTAGTTCAACCGTAGTAATGCCTTGATAAACACC 133802 Query 78893 TTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACA 78952 | ||| || || ||||| ||||| | ||||| || ||||| || || || Sbjct 133803 AGATACAACCTTTTGAGCAATTTTAGCAGGAACAACAAAATCTTCGTTCAGACCGTAGCA 133862 Query 78953 TAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCAT 79008 | ||| ||||| || || || |||||||| || ||||| || || | ||||| Sbjct 133863 AAGCTTTGATATACGCGAGGTTATCTTATCAAACATGACATTTTCTTTTCTTCCAT 133918 >seq80 Length=87281 Score = 286 bits (316), Expect = 5e-72 Identities = 572/839 (68%), Gaps = 19/839 (2%) Strand=Plus/Plus Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 |||||| ||| ||||| || || || || || || ||||||| | || || | || Sbjct 44259 TTGATAATCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 44318 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 |||||| ||||||||||| || | ||||| || | ||||| | | || || Sbjct 44319 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 44378 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 | ||| ||||||||||| || || ||||| || | ||||| || || || Sbjct 44379 ACGATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGC 44438 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTAT--TATC 48089 || || ||||| ||||| | ||| |||||||| || ||||||| |||| || |||| Sbjct 44439 GACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATATC 44498 Query 48090 GATGTTACCGTTTCCTCACTTGGTGGAT-ACAACAAATGTTTAAACATTAAACATGCAAA 48148 || || ||| | || || | | || | | ||| |||| | | ||| ||||| Sbjct 44499 CTTG--ACGCGTTCTTGGCTAGGACGCTTACGA-AGATGGGTAAATAAAAGACAAGCAAA 44555 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 ||| ||||||||||||||| | || || ||||| || ||||| | ||||||||| Sbjct 44556 GTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCAT 44615 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 || |||||||||||||||||||| || | || || || ||||| ||||| || ||||| Sbjct 44616 CAGACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTC 44675 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTT---GTGTATCCACCG 48325 || || ||||| || ||| | || | || | |||| | ||||| Sbjct 44676 GACAGCAGCAAAGGCAACAAGACGTTCAGCAAAA---GAACCGTTAGAGGAAATCCA--T 44730 Query 48326 TTG--TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGA 48383 ||| |||||||||||||| |||| | |||||| || || || |||||| |||||| Sbjct 44731 TTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGC 44790 Query 48384 AAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAG 48443 | | ||| || | | | ||||| | ||||| || || |||||||| || |||| | | Sbjct 44791 ATTTCTTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCG 44850 Query 48444 TGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACC 48503 |||||||||||||| || ||||| || || |||||| | ||||| | |||| || Sbjct 44851 TGAATATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACT 44910 Query 48504 TCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAAT 48563 || |||||| || | |||| || ||||| || || ||||| | ||||||| || Sbjct 44911 TCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAG 44970 Query 48564 GCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT---CCAGTCATTG 48620 || || || | ||||| | |||||| |||| || || ||| |||| Sbjct 44971 GCCAAAACGCGAGAGATAAAGAAACGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGA 45030 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATA 48679 | || || | ||| | |||||||||||||||||| || || || ||||| ||||| Sbjct 45031 AGGTCCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 45089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663633400800