Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq80 228 8e-55 >seq80 Length=87281 Score = 228 bits (252), Expect = 8e-55 Identities = 470/694 (68%), Gaps = 14/694 (2%) Strand=Plus/Plus Query 23343 ATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTTTTAC 23402 ||| || || ||||| || || ||||||||||| || |||| || || || || || Sbjct 44382 ATCAGCAACGAATTCGATGTACTGACACATCAAGGCAGAGTTCATGCCGATGAGAGCGAC 44441 Query 23403 TGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATTTGAAC 23462 |||| ||||| || ||| || ||||||| ||||| || || || | | Sbjct 44442 GGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATAT---C 44498 Query 23463 AATAAC---TTCTTCACTAGGTGGATATTTTAAATACTTAAACAATAAACATGCAAAATC 23519 | || ||||| ||||| | | | || |||| || | ||| ||||| || Sbjct 44499 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 44558 Query 23520 ACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAA 23579 | ||| || |||||||| | || ||||||||||| ||||| || || ||||| | Sbjct 44559 AGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCGGGCATCAG 44618 Query 23580 TCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAAC 23639 || |||||||| | |||||| || | |||||| || || || ||||| ||||| || || Sbjct 44619 ACCACGTTTTTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGAC 44678 Query 23640 AGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttt 23699 ||| |||||||| ||||||||| | |||| | | ||| | ||||||||||| Sbjct 44679 AGCAGCAAAGGCAACAAGACGTTCAGCAAAAGAACCGTTAGA---GGAAATCCATTTGAA 44735 Query 23700 tGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 | ||||| |||||| || | ||| || || ||||| || ||||| | Sbjct 44736 GGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 44795 Query 23760 TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAAT 23819 ||| |||| || ||| | ||||| || ||||| | | ||| || |||| | ||||| Sbjct 44796 TTTCTCTTGGTTGTCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 44855 Query 23820 ATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATT 23879 ||||||||| || ||||| ||||| |||||| ||||||||| | | || |||| Sbjct 44856 ATTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTGACTTCATC 44915 Query 23880 AAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAG 23939 | |||| ||| | | || ||||| |||||||| ||||| | |||||||||| || | Sbjct 44916 ACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCAA 44975 Query 23940 AAC---ATATTTTATAAAATGTCTTTCATCAGTTGATAAT-TTTTTCCAATCATTAATAT 23995 ||| | | | | ||| || | || | | || | |||| |||||||| || | Sbjct 44976 AACGCGAGAGATAAAGAAACGTTCGTTTTC-GGTCATCTTGTTTTCCCAATCATGAAGGT 45034 Query 23996 CTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | || ||||| | ||| ||| |||||||||| Sbjct 45035 CCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAA 45068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521484121433000