Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq57 138 3e-27 seq24 138 3e-27 seq10 132 1e-25 >seq57 Length=110979 Score = 138 bits (152), Expect = 3e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || ||||| ||||| || | || || || || ||| Sbjct 11437 CAAATCTTTGTCAAGACACTTACTGGAAAGACGATTACTTTAGAAGTCGAGTCTTCTGAC 11378 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || |||||||| ||||| ||||| ||||| || ||||| || || ||| Sbjct 11377 ACTATCGACAATGTAAAACAAAAAATTCAAGACAAGGAAGGTATTCCTCCTGATCAACAA 11318 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || ||||| ||||||||||| | || || ||| |||||| || Sbjct 11317 CGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGTCGTACCCTAAGCGACTATAACATC 11258 Query 178104 CAAAAAGAATCAACACTGCAT 178124 ||||| ||||| || || ||| Sbjct 11257 CAAAAGGAATCTACTCTTCAT 11237 >seq24 Length=153386 Score = 138 bits (152), Expect = 3e-27 Identities = 122/150 (81%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || |||||||| || |||||||| ||||||||||| ||||| ||||| || ||||| Sbjct 151964 AGTTCCGACACCATTGACAACGTCAAGCAAAAGATTCAAGACAAGGAAGGTATTCCTCCT 151905 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGA 178093 ||||| ||||| |||||||| ||||| ||||| |||||||| || | || |||| ||| Sbjct 151904 GACCAACAACGTCTTATCTTTGCCGGTAAACAACTCGAAGACGGTCGTAC-CTTGAGCGA 151846 Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCA 178123 |||||| ||||||| ||||| || || || Sbjct 151845 CTATAACATCCAAAAGGAATCTACTCTCCA 151816 >seq10 Length=205532 Score = 132 bits (146), Expect = 1e-25 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| ||||| || ||||| || || || ||||| || | || || ||| Sbjct 110217 AAAATGC---AAATCTTCGTAAAGACTCTTACCGGCAAGACGATTACTTTAGAAGTCGAA 110273 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || | ||||| || ||||| ||||||||||| ||||| ||||| |||||||| Sbjct 110274 TCTTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGACAAGGAAGGTATCCCTCCT 110333 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| || |||||||||| || || ||||| || || ||||| | ||| | || Sbjct 110334 GACCAACAGAGACTTATCTTTGCTGGTAAACAACTTGAGGATGGTCGTACTTTGAGTGAC 110393 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || ||| ||||||| ||||| || || || |||| Sbjct 110394 TACAACATCCAAAAGGAATCTACCCTTCA-CTTG 110426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203722023430430