Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F002083735.1_202017-04-12] 595 sequences; 24,077,254 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq57 87.8 2e-12 >seq57 Length=110979 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || || ||||| || |||||||||||| Sbjct 11214 CCACCACGGAGACGAAGGACCAAATGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTT 11273 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || ||||| || || || || || || || || ||||| || | ||| Sbjct 11274 AGGGTACGACCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGA 11333 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | |||||||| |||||||| || || | || | |||||| ||||| | Sbjct 11334 ATACCTTCCTTGTCTTGAATTTTTTGTTTTACATTGTCG--ATAGTGTCAGAAGACTCGA 11391 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTAT 41867 | || | || ||||| || || || || ||||| || || || |||||| ||| Sbjct 11392 CTTCTAAAGTAATCGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATAT 11445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462300561614000