Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq107 145 8e-30 >seq107 Length=77526 Score = 145 bits (160), Expect = 8e-30 Identities = 292/427 (68%), Gaps = 16/427 (4%) Strand=Plus/Plus Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747 || || ||||| || ||||| || ||||| | ||||| || | ||||| || ||||| Sbjct 39747 ACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAAT 39806 Query 16748 GGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTA 16805 ||||| ||||| || |||| || | || | || || | | || | | ||| || | Sbjct 39807 GGATTGGTAGCCATGTAAATCTTGTCGAAT--CCAAGAGCAACCATGAGGCGATCAGCAA 39864 Query 16806 CAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAG 16865 | ||||| || ||||||||||| || | | ||||| || || ||| || ||||||| Sbjct 39865 CGAATTCGATGTATTGGCACATCAAGGCAGAATTCATGCCGATGAGAGCAACGGGAAGAG 39924 Query 16866 CTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA--CTAGCAACTCG 16923 | |||||||||||| || || || || |||||| || ||| || | || || Sbjct 39925 CATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATCCTTG--ACGCG 39982 Query 16924 TTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAAT 16979 ||| || ||||| | || | |||||| |||| | ||||| || || || || Sbjct 39983 TTCTTGGCTAGGACGCT-TACG---AAGATGGGTAAATAAAAGACAAGCAAAGTCAGTAT 40038 Query 16980 GTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTC 17039 | | || || || | | ||| | ||| || |||||||| || |||||| || | Sbjct 40039 GAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAAACCAC 40098 Query 17040 GTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATG 17099 ||||||| | |||||| || | || || || ||||| ||||| ||||| ||||| | | Sbjct 40099 GTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGACAGCAG 40158 Query 17100 CAAACGC 17106 |||| || Sbjct 40159 CAAAGGC 40165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517536633522480