Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 seq27 104 2e-17 >seq1 Length=2399970 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||| | ||||| |||||||||||||| ||||| |||| ||| || || ||| Sbjct 342553 ACCAGGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTACGACCGTCTTCG 342494 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| |||||| | |||||||| || || || ||||| || || ||||| ||| | Sbjct 342493 AGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCTTCCTTATCTTGA 342434 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||||| || || | ||| | | || | ||| || || | ||| | || || Sbjct 342433 ATCTTTTGCTTGACATTTTCAATACTATCGGAAGACTCAACTTCCAAGGTGATGGTCTTA 342374 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || ||||| || ||||| Sbjct 342373 CCAGTAAGAGTCTTGACAAAGATTTGCAT 342345 >seq27 Length=327670 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| || ||||||||||||||||| |||| || || || ||| Sbjct 85906 ACCAAGTGAAGGGTAGATTCCTTTTGAATGTTGTAATCACTCAAGGTACGACCGTCTTCG 85847 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| || ||| | |||||||| || ||||| ||||| || || ||||| ||| Sbjct 85846 AGTTGTTTACCGGCGAAAATGAGACGTTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 85787 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCT 118684 || ||||| || || | || | |||||| | ||| Sbjct 85786 ATCTTTTGCTTGACATTGTCAATGGTGTCAGAGCT 85752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433823071791112