Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 2e-15 >seq1 Length=2399970 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || |||||||| | |||| |||||| || ||||| || || | Sbjct 342571 CCGCCACGAAGACGAAGAACCAGGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTC 342512 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGG 34280 | ||| |||| || | || || || ||||||||||| || || ||||| || || Sbjct 342511 AAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGG 342452 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 || || ||||| || ||||||||||| | || | || ||||| || || | Sbjct 342451 ATAC-CT-TCCTTATCTTGAATCTTTTGCTTGACATTTTCAATACTATCGGAAGACTCAA 342394 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| |||||||| || || || ||||| || |||||||| ||||| Sbjct 342393 CTTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGACAAAGATTTGCAT 342345 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | |||| |||||| || ||||||||||| || || |||| | || Sbjct 341858 AGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCC 341799 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC--GACGGGCACGCTCTCCTTGT 34295 || | || || || || || || || | ||| ||||| || || || || ||||| | Sbjct 341798 TCGAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATAC-CT-TCCTTAT 341741 Query 34296 CGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355 | ||||||||||| | || | || ||| | |||||||| || | || || | Sbjct 341740 CTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATTG 341681 Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||||||| ||||| || || ||||| ||||| Sbjct 341680 TCTTGCCGGTAAGAGTCTTTACGAAGATTTGCAT 341647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323066542708160