Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq176 183 2e-41 seq13 174 1e-38 >seq176 Length=52331 Score = 183 bits (202), Expect = 2e-41 Identities = 403/601 (67%), Gaps = 31/601 (5%) Strand=Plus/Minus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||||| || || || | || || || || ||||||||||||||||| ||||| || Sbjct 28279 ACCGTCGTGAAGGTGACCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGCGCCA 28220 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||| |||||| | || ||||| |||||||| || |||||||||||| | || | Sbjct 28219 AATACGTTGACTGTGATACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGA 28160 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 || || || |||| || || | || | ||||| ||| | | || |||||| || Sbjct 28159 TTGATACTATAAAAAACAATCCCACTGATCGTAGAATCATTCTGTCAGCATGGAACCCTG 28100 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 |||| | ||| | ||||||||||| || |||||| | || || ||||| || ||| Sbjct 28099 CAGATATTCCTATCATGGCTTTGCCACCTTGTCATGCTTTTTGTCAGTTTTATGTATCTA 28040 Query 20447 AT-----AATGAATTGT---CGTGTCAA-------------ATGTATCAACGATCCGCTG 20485 || | | || || |||| ||| | |||||||| || | Sbjct 28039 ATCCACCACAGGATAGTGGACGTGCCAAGCTATCTTGTGTGCTCTATCAACGTTCTTGCG 27980 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||||||||| ||||||||||||||||| |||||| || | || ||||||| Sbjct 27979 ATATGGGACTGGGGGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTG 27920 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| |||||| | || | ||||| || | || || || || || | ||| ||| Sbjct 27919 CGCATGTAACAGATCTTGAACCTGGTGAATTCATACATACAATGGGCGATACACATGTTT 27860 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAA 20665 | | ||||| | || | | || |||| | ||| |||| || | ||||| | Sbjct 27859 ATGTGGATCATCTTGACGCACTTAAGCAACAGGTTCAACGTGAACCCAAGCCTTTCCCTA 27800 Query 20666 CTCTTCGCATTACTCGAACTGTTAA--AGATATTAACGAT--TTTAAAG-CTGATGATTT 20720 || | | | || ||| || || ||||| || |||| ||| ||| ||| ||||| Sbjct 27799 CTTT----AAAAATC-AACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTT 27745 Query 20721 TGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATAT 20780 ||| |||||| || | ||| || | ||| |||| |||||||||| ||||| || Sbjct 27744 TGTATTAGAAAACTACAGTCCTCACAGCAAAATAGAAATGAAAATGTCTGTCTAATAAAT 27685 Query 20781 A 20781 | Sbjct 27684 A 27684 >seq13 Length=664605 Score = 174 bits (192), Expect = 1e-38 Identities = 400/601 (67%), Gaps = 31/601 (5%) Strand=Plus/Plus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 |||||| || || ||| | || || || || ||||||||||||||||| ||||| || Sbjct 416438 ACCGTCGTGAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCA 416497 Query 20267 AATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTA 20326 |||| ||||| | | ||||| |||||||| | |||||||||||| | || | Sbjct 416498 AATACGTTGATTGTGATGCTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGA 416557 Query 20327 TTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTA 20386 || | || |||| || || | || | ||||| ||| ||| || |||||| || Sbjct 416558 TTGACACTATAAAAAACAATCCCACTGATCGCAGAATCATTCTATCAGCATGGAACCCTG 416617 Query 20387 AAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTA 20446 |||| | ||| | |||||||| || || |||||| | || |||||||| || ||| Sbjct 416618 CAGATATTCCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAATTTTATGTATCTA 416677 Query 20447 AT---------AATG------------AATTGTCGTGTCAAATGTATCAACGATCCGCTG 20485 || ||| | || || ||| | |||||||| || || Sbjct 416678 ATCCACCGCAGGATGGCGGACGTGCCAAGTTATCTTGTGTGCTCTATCAACGTTCTTGTG 416737 Query 20486 ATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTG 20545 ||||||| ||||||||||||||||||||||| |||||| || | || ||||||| Sbjct 416738 ATATGGGGCTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTG 416797 Query 20546 CACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTT 20605 | ||||| |||||| | | | ||||| || | || || || || || | ||| ||| Sbjct 416798 CGCATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTT 416857 Query 20606 ACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAA 20665 | | ||||| | || | | || |||| | ||| |||| |||| ||||| | Sbjct 416858 ATGTGGATCATCTTGACGCACTCAAGCAACAGGTTCAACGTGAACCCAAACCTTTCCCTA 416917 Query 20666 CTCTTCGCATTACTCGAACTGTTAA--AGATATTAACGAT--TTTAAAG-CTGATGATTT 20720 || | | | || ||| || || ||||| || |||| ||| ||| ||| ||||| Sbjct 416918 CTTT----AAAAATC-AACCGTAAAGTAGATACTATCGATGATTTCAAGTTTGAAGATTT 416972 Query 20721 TGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAATATAT 20780 ||| ||||| || | ||| || | | ||| |||| |||||||||| ||||| || Sbjct 416973 TGTATTAGAGAACTACAGTCCTCACAGTAAAATAGAAATGAAAATGTCTGTCTAATAAAT 417032 Query 20781 A 20781 | Sbjct 417033 A 417033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399177257033770