Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq107 192 6e-44 >seq107 Length=77526 Score = 192 bits (212), Expect = 6e-44 Identities = 546/835 (65%), Gaps = 8/835 (1%) Strand=Plus/Plus Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||| ||| || | |||||||||||||| || || |||| || || || | || Sbjct 39734 TTGATAGTCAGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTC 39793 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 |||||| ||||||||||| || | ||| | | || || | || || | | | | Sbjct 39794 CATAAAGTCAAATGGATTGGTAGCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAG 39853 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 | ||| |||| ||| || || ||||| |||| || || ||||||| || || || Sbjct 39854 GCGATCAGCAACGAATTCGATGTATTGGCACATCAAGGCAGAATTCATGCCGATGAGAGC 39913 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 || |||| || || |||||||| | ||| || ||||| || || ||| Sbjct 39914 AACGGGAAGAGCATCCGTCAAAAATTCCTGTTCAATGCTGACAGCTTCCAAGATGATATC 39973 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 | | | ||| | |||| | | ||||| |||| | | ||| ||||| || Sbjct 39974 CTTGACGCGTTCTTGGCTAGGACGCTTACGAAGATGGGTAAATAAAAGACAAGCAAAGTC 40033 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 | ||||||||| ||||| | || || | ||| || ||||| || || |||||||| Sbjct 40034 AGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCAGGCATCAA 40093 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 || ||||| || | |||||| || | ||| || || || || ||||| || || || || Sbjct 40094 ACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAGATACCTTCGAC 40153 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCT 14394 |||||||| || | | || || |||| || | || | || ||||| || Sbjct 40154 AGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGTTAGAG---GAAATCCACTTGAA 40210 Query 14395 AGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC 14454 ||||| |||| ||| |||| ||| || || || ||||||||| ||| | ||| Sbjct 40211 GGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAAGAGCATTTC 40270 Query 14455 CTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTAT 14514 ||||||| || | || || || ||||| | | || || |||| | ||| || Sbjct 40271 TTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTCTGCGTGAAT 40330 Query 14515 GTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG-ACCATTGTACCTCTG 14573 |||||| || || ||||| ||||| |||||| ||||||| | | ||| || || Sbjct 40331 GTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATCTTG-ACTTCAT 40389 Query 14574 AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14633 |||| ||| |||| ||||||||||| || ||||| | | ||||| || |||| Sbjct 40390 CACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCAAAGAAGGCCA 40449 Query 14634 ATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAAT 14690 | | | |||||| | || | ||| | | |||| |||||| | || Sbjct 40450 AGACGCGAGAGATAAAGAAGCGTTCGTTTTCGGTCATCTTGTTTTCCCAATCATGAAGAT 40509 Query 14691 CCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATA 14745 |||| | ||| | ||| ||| |||||||||| ||| ||||||| ||||| Sbjct 40510 CCTTGCTCAAATCGATTTCTTCAGCTGTCCAAAAGGAAGCTTCAGCTTTCTTATA 40564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482337243362480