Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 >seq1 Length=2399970 Score = 111 bits (122), Expect = 1e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| |||||| || ||||||||||| ||||||||||| | | || | ||| Sbjct 341858 AGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCC 341799 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||| || ||| |||||||||| ||||| || || | ||||||||||| Sbjct 341798 TCGAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGGTCAGGAGGGATACCTTCCTTATCT 341739 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||| | ||||||||| | | | | | | ||| | ||| ||| | || || | Sbjct 341738 TGAATCTTTTGCTTGACATTTTCGATACTATCAGAAGATTCGACTTCTAAAGTAATTGTC 341679 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332 |||||||| | || ||||| || |||||||||||| || Sbjct 341678 TTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTTTTAA 341640 Score = 95.1 bits (104), Expect = 9e-15 Identities = 162/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 18091 TTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGT 18150 ||| || || || || || | ||| |||| |||||| || ||||||||||||||||| | Sbjct 342579 TTTATTGACCGCCACGAAGACGAAGAACCAGGTGAAGAGTAGATTCTTTTTGAATGTTAT 342520 Query 18151 AGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGAT 18210 | || || || || ||||| | |||||| || || | || || | |||||| | Sbjct 342519 AATCACTCAAAGTACGACCGTCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGT 342460 Query 18211 CCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGG 18270 | || | ||||||||||| ||| | ||||||||| | | ||| | | || | Sbjct 342459 CAGGAGGGATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCAATACTATCGGAAG 342400 Query 18271 GCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| ||| | ||||||| | || || || | || || ||||| |||||||| Sbjct 342399 ACTCAACTTCCAAGGTGATGGTCTTACCAGTAAGAGTCTTGACAAAGATTTGCAT 342345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379337592168570