Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq17 288 9e-73 seq47 235 5e-57 seq1 159 3e-34 seq107 147 2e-30 seq4 113 4e-20 >seq17 Length=565816 Score = 288 bits (318), Expect = 9e-73 Identities = 972/1502 (65%), Gaps = 27/1502 (2%) Strand=Plus/Plus Query 22493 TAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAA 22552 |||| |||||||||| | ||||| ||| | |||||| || || || |||| || ||| Sbjct 454834 TAAAAGTTGGATGTGTAAGGTTCAAAACACTCATTGAAACCGAGCATTTGAGAAGTGGAA 454893 Query 22553 GCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTC 22612 || || ||||| || || | ||| || ||||| | | || ||||| | ||| || | Sbjct 454894 GCAGTAGGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCC 454953 Query 22613 TTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGC 22672 ||||| | ||||||||| |||| || || || ||||| |||||| ||||||||| Sbjct 454954 TTGAGTGCGGCCCAGTCCCAGAGATTGGTAGGTGTGACATT---CCACATGTCGTATTGC 455010 Query 22673 A--ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGG 22730 | | || | || | || |||||||| || |||||||| || ||||| | | | Sbjct 455011 AGGATACCCTTGGATACA--GGACTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAG 455068 Query 22731 CAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA 22790 | | |||||| || ||||| || | | || || || || ||||||| |||||| Sbjct 455069 CCAACTCGCAGGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCA 455128 Query 22791 ATTCGGCGGC----GGCGACGCTTTCGTACGGCATA-CGCATCATCACGAACGCGTCCGC 22845 | ||| || || ||| | || ||| || | || ||| | ||| || Sbjct 455129 GCTGCTTGGCTTCAGGTGAA----TCGAATGG-ATAGCGAAGAGCCATGAAAGTGTCGGC 455183 Query 22846 CATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGG 22905 | || ||||| |||| ||| ||||||| | | || || || || || ||| Sbjct 455184 TAAGCCTTGAACACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGAT 455243 Query 22906 CAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTAT 22965 | ||| || |||| |||||| | ||||||||||||| || | || || || | Sbjct 455244 GACAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAAC 455303 Query 22966 NNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGATTGTACAACAAACTTGTTGACGGCGA 23024 | || || || | | ||| || || | | | || | Sbjct 455304 ATCGTGCAGTTTTTGGAAATCATACTTTTCTCTATTAATCA-CATAGGTAGGCAGAGCAA 455362 Query 23025 TCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGAC--GTGTACTCTACAATTTCGGT 23082 | ||||| | || || || || || ||||| |||| | ||| || |||||||| || Sbjct 455363 TGGAGGCCAAGTTACAGACAGCGACTTCGTCA--GGACTCGAGTATTCAACAATTTCTGT 455420 Query 23083 ACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGA 23142 ||| || ||||| || || ||||| ||||| || ||| || || |||| || || | Sbjct 455421 ACACAGGTTGCTGCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGC 455480 Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202 |||||| ||||| ||| |||| | || ||||| || | ||| | || || ||| Sbjct 455481 ATCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCCTCCAAAATGGCATACCA 455540 Query 23203 CATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACA 23261 || | ||||| | | || | | | || ||||| ||||| |||| || | Sbjct 455541 CAGCTTTTGAGCCTTGATT-GTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGA 455599 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321 || |||| || |||| || || | || || | | | ||||| | | Sbjct 455600 GAGCAACAAACTCATCACCCCAAATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACA 455659 Query 23322 GACTCCACATTGAGTCATTTTCA-ACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCG 23380 || ||| || | | || || || ||| || ||||| || ||||| ||||| Sbjct 455660 GAGACCA-ATCACCACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGCA 455718 Query 23381 TAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAG 23440 |||||||| ||||| || | | || |||||||| ||| ||| |||||| |||||| Sbjct 455719 TAGAACAGATCGCGAGCTCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAG 455778 Query 23441 TCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTG 23500 || | ||| |||||||| || || | ||| | || || |||||||| | ||||| Sbjct 455779 GTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGTTTATTA 455838 Query 23501 CCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCG 23560 ||||| |||||||| ||||| ||||| |||||| | || | ||||| |||| | ||| Sbjct 455839 CCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAATCCG 455898 Query 23561 TTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGG 23620 ||||| ||| ||| || | | || || | || |||| |||||||| || Sbjct 455899 TTGGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTC 455958 Query 23621 AAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATG 23680 || || ||||| || | | || || || || || ||| || || || ||||| Sbjct 455959 AAGCCAATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATA 456018 Query 23681 CCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGC 23740 || ||||| || || || | | || |||||| || ||||||||||| | || Sbjct 456019 CCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGGT 456078 Query 23741 GTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTG 23800 || | || || || || || || ||||| || ||||||| | ||||| | ||| Sbjct 456079 GTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTATCTTTCGGACATCAAGTTG 456138 Query 23801 TACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATC 23860 || || || || || |||||||| || ||| || |||||||| || || ||||| ||| Sbjct 456139 TATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATTGCAACACGCATGATC 456198 Query 23861 ATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATC 23920 | | |||||| | || | | ||||| ||| |||| || || ||||| | | Sbjct 456199 AAATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGG 456258 Query 23921 GTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAA 23980 ||||| || ||||| ||| || || || ||||| || | | ||||| || ||||| Sbjct 456259 GTTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGTCATAGATGATGGCAGAGTTCAAG 456318 Query 23981 CG 23982 || Sbjct 456319 CG 456320 Score = 131 bits (144), Expect = 1e-25 Identities = 402/619 (65%), Gaps = 2/619 (0%) Strand=Plus/Minus Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 ||| |||||||| || | ||||| | |||||| ||||| ||||||| ||||| Sbjct 414566 CATGAAAAGATCAGGCACCCATAATCCCAAGAACAAGTCGCGTGCGCGCATTTCCTCAGC 414507 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 || ||||||| ||| ||||| || || || ||||| ||||||| || || | || Sbjct 414506 ACCATTGTTCTTGCGCAAGTCCAAGAATTCGAATACGTCGACATGCCAAGGTTCTATATA 414447 Query 23473 AACGGCAAACGCGCCCGGT-CTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 || ||||| | ||| | | ||| || || || || | || || |||| | Sbjct 414446 GACAGCAAA-GTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCGAGCAGTGTCAT 414388 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 | | ||||| ||||| || | | || ||||| | |||| | || || | | | Sbjct 414387 TAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTGCCGTTTGTTCCTGCGATATAAG 414328 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || | |||| || ||| | | || | || || | || || || || Sbjct 414327 AGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAGACTTGGAGATAC 414268 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 || || | | ||| ||||||||||| ||||| ||||||||||| | || | Sbjct 414267 GAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTTTCATTTGAACAA 414208 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 ||| || ||||| ||| | ||| || ||| | || ||||| ||| || | || | Sbjct 414207 GGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATGTAGGTGTAGCAT 414148 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | ||||||||| | ||||| |||| || || || |||| || | ||| | | Sbjct 414147 GAGTAAAGTATTTAGATGACATAAGATCATAGGTTCTGAAGGCGCTTTCTAGGTCATTAC 414088 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891 |||| || || || || || ||||| |||||||||||||||| || || | || | Sbjct 414087 CGTGAATGCCAATAGCAACACGCATGATCATGTATTGAGGTCGTTCAACGATTTCGTTAT 414028 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | || || |||| || ||||| | ||||||||| ||||| ||| | | | ||| | Sbjct 414027 TGATCTTTAACAAGTAACTACGTTCTAACGTTTTAAAGCCAAAGAAGTTAAAATCAAAAT 413968 Query 23952 CACGATCGTGCACTATGGC 23970 | | |||||| | |||||| Sbjct 413967 CTCTATCGTGAATTATGGC 413949 >seq47 Length=189370 Score = 235 bits (260), Expect = 5e-57 Identities = 760/1168 (65%), Gaps = 14/1168 (1%) Strand=Plus/Plus Query 23062 CGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTG 23121 || ||| || |||||||| ||||| |||||||| ||||| ||||| ||||| || ||| Sbjct 152653 CGAGTATTCAACAATTTCTGTACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTG 152712 Query 23122 GTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTG 23181 || || |||| || || | |||||| ||||| ||| |||| | || ||||| || Sbjct 152713 ATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTG 152772 Query 23182 CGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTT 23240 | || | || || ||| | | ||||| | | || | | | || |||| Sbjct 152773 AGCTTCCAAAATGGCATACCATAGCTTTTGAGCCTTGATT-GTTTCTCTAGCTCTTCCTT 152831 Query 23241 CTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGG 23300 | ||||| |||| || | || |||| ||| |||| | || | || | Sbjct 152832 CACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACCCCAGATTTCATGTAATCCAG 152891 Query 23301 GCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCA-ACGCGTCTCATAAAA 23359 | | || | ||||| | ||| ||| || | | || || || ||| ||| Sbjct 152892 GAGCTTCATTGGGACAAAACAGAGACCA-ATCACCACCGTCTCTGACACGCTGCATGAAA 152950 Query 23360 AGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTG 23419 ||||| || ||||| ||||| |||||||| || || || | | || |||||||| | Sbjct 152951 AGATCAGGAATCCAGAGAGCATAGAACAGATCACGAGCTCTGATTTCGTCTTTGCCAAAG 153010 Query 23420 TTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCA 23479 || ||| || || |||||| || | || |||||||| || || | ||| | || Sbjct 153011 TTTTTTCGTAAGTCTAAAAAGGTGAAAATATCTGCATGCCAGGGTTCCAAGTACATTGCG 153070 Query 23480 AACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACT 23539 || |||||||| | |||||| ||||| |||||||| ||||| ||||| |||||| | || Sbjct 153071 AATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACA 153130 Query 23540 CTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT 23599 | ||||| |||| || |||||||| ||| || || | || || | Sbjct 153131 CGGAGCATGGGCAATAGTCCGTTGGAGTAACCGTTGGTACCGGCAATGTATGATCCACTA 153190 Query 23600 GCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCAT 23659 || |||| |||||||| || || || || || || | | || || || || || Sbjct 153191 GCACGAATGTTGTGAATGTTCAAGCCAATACCACCTGCTGTCTTGGAGATTTGAGCACAG 153250 Query 23660 TGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACAC 23719 ||| || || || ||||| || ||||| || || || | | || |||||| || Sbjct 153251 ATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAA 153310 Query 23720 GAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAG 23779 |||||||| || | || || | || || || || || || ||||| |||||| Sbjct 153311 GAAGACATCTGGGGACGAGGTGTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAG 153370 Query 23780 TATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATA 23839 |||| | ||||| | ||||| || || || || |||||||| || ||| || ||| Sbjct 153371 TATCTTTCAGACATCAAGTTGTATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATA 153430 Query 23840 CCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTG 23899 ||||| || || ||||| |||| | |||||| | || | | ||||| ||| ||| Sbjct 153431 CCGATCGCAACACGCATAATCAAATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCTTG 153490 Query 23900 AACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCG 23959 | || || ||||||| | ||||| || ||||| ||| || || || ||||| || Sbjct 153491 AGGAGGTAAGAACGTTCGAGGGTTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGTCA 153550 Query 23960 TGCACTATGGCCGAATTCAAACGGTACGCATTGGCAGCGATGATGTTGTAATGAAAATTC 24019 | | ||||| || ||||| |||| || || | || || ||||| ||| Sbjct 153551 TAGATGATGGCAGAGTTCAAGCGGTCAGCGTTATCCATGACGACTTTGTACGTTTCATTA 153610 Query 24020 GATATCATCGGCGTTTTAACGCCGGTCTTTGGATCGATCGCTTCAT---ACATATCGATA 24076 |||||||| || | | ||| ||||| |||| || | | || ||| || Sbjct 153611 GATATCATGGGTGAGTGTTTGCCTGTCTTGGGAT---TCACATAATTGTACAAGTCTTCG 153667 Query 24077 ATGACATCGAAAAAAGAA-TCTTTAGTCTCCTTGTGCAAATTAGACACGGCCAATCTAGC 24135 || || | || |||||| | ||| ||||||||||| | |||||| | ||| | | || Sbjct 153668 ATTACTT-GAGAAAAGACCTTTTTGGTCTCCTTGTGAAGATTAGAAATGGCAATGCGCGC 153726 Query 24136 CGCAAGCAACGAATAGTCGGAATGATCGA-TGGTCATGGCCGCTGCCGTCTCGGCGATTA 24194 || | || | ||| || | ||| ||| ||||||| || || || || || | Sbjct 153727 AGCCAACAGAGCATAATCAGGATG-GCGAGTGGTCATATAAGCAGCTGTTTCTGCAGCAA 153785 Query 24195 GATTGTCCAATTCAGCGGTGGTCACGCC 24222 | || || | ||| |||| || ||||| Sbjct 153786 GGTTATCGAGTTCGACGGTTGTAACGCC 153813 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22153 ATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTT 22212 ||| |||||||| ||||| || ||| ||||||| || ||||| || || || |||||||| Sbjct 108702 ATAGTACATGCCAGTCTTTAGTCCCTTCTTCCAGGCATAAAAGTGCATAGAAGTCAATTT 108643 Query 22213 TCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCC 22272 ||| | | || | | | ||| ||| | || ||| || || ||||| ||||| Sbjct 108642 GCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGAGATTGGTCAATAAAGGCTCC 108583 Query 22273 TCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAG 22332 || ||| |||||||| | || | || | || || ||||| ||||||||||| || Sbjct 108582 TCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATCTCCCACACGGTCTTGTATAG 108523 >seq1 Length=2399970 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || || || || |||||| | || ||||| | ||| Sbjct 342345 ATGCAAATCTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAAGTTGAGTCTTCC 342404 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || ||| | |||| ||||| || | || || |||||||| | || || ||||| Sbjct 342405 GATAGTATTGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGACCAA 342464 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || |||||||| ||||| | |||||| | ||| |||| ||||||||| Sbjct 342465 CAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTATAAC 342524 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 |||||||||||||| |||||||| ||||| ||| | || | |||||| Sbjct 342525 ATTCAAAAAGAATCTACTCTTCACCTGGTTCTTCGTCTTCGTGGCGGT 342572 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||| |||||||||||||| || ||||| || || || | || || ||| | Sbjct 341643 AAAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTCGAATC 341702 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || || ||| |||||| ||||| || | || || |||||||| | || || || Sbjct 341703 TTCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGA 341762 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||| ||| | || || || ||||| ||||| | || || ||| | || || Sbjct 341763 CCAACAGAGACTTATCTTTGCTGGTAAACAACTCGAGGATGGCCGTACTCTCTCTGACTA 341822 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||||||||| |||||||| |||| || Sbjct 341823 CAACATCCAAAAAGAATCTACTCTTCACTTGGTCCT 341858 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || || ||||| || ||| | || ||| || Sbjct 341875 ATGCAAATCTTTGTCAAGACTCTTACTGGTAAAACTATTACCTTAGAAGTTCGTAATTCT 341934 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || ||| |||||| ||||| || | || ||||||||||| | || || |||||| Sbjct 341935 GANAGTATCGAAAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCTCCTGACCAG 341994 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 || ||||| || |||||||| ||||| | ||||| Sbjct 341995 CAACGTCTTATTTTCGCTGGTAAACAACTTGAAGA 342029 >seq107 Length=77526 Score = 147 bits (162), Expect = 2e-30 Identities = 555/864 (64%), Gaps = 34/864 (4%) Strand=Plus/Minus Query 57545 CATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTT 57604 ||| |||| |||| ||| |||| | ||| | | || || || || ||||| || || Sbjct 40597 CATATTTCTTATTG--TATTCAGA--TCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTT 40542 Query 57605 TTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGA 57664 |||||| | |||||| | || || |||||||| |||||||| ||| | Sbjct 40541 TTGGACAGCTGAAGAAATCGATTTGAGCAAGGATCTTCATGATTGGGA-------AAACA 40489 Query 57665 ATCTGAGAGAAAT----------TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCG 57714 | ||| |||| ||||| | ||| ||||| || || || | || | Sbjct 40488 AGATGACCGAAAACGAACGCTTCTTTATCTCTCGCGTCTTGGCCTTCTTTGCTGGTTCAG 40429 Query 57715 ATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAG-TGACGGAG 57773 |||| |||||||| || || ||||| ||| |||| | ||||| |||| | | || Sbjct 40428 ATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTGATGAAGT-CAAGATTCCTGAA 40370 Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833 || | ||| || || || |||||| | ||||||||| | || |||||| || Sbjct 40369 GCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAAACATTCACGCAGAAACTTACAGT 40310 Query 57834 CTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATC 57893 || | || || || || | || || ||| | |||||| | || || || || Sbjct 40309 CTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAAGAAATGCTCTTTTCTGCTATT 40250 Query 57894 GAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCC 57953 || || || || ||| | ||||| || ||| | |||| ||||| | | Sbjct 40249 GACACTATCCCTTGTATCAAAAGAAAGGCTGATTGGGCCTTCAAGTGGATTTC---CTCT 40193 Query 57954 ACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCG 58013 | | | || || ||| | || | || || || || ||||||||||| ||||| || Sbjct 40192 AACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCT 40133 Query 58014 GGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTT 58073 || |||||| | || |||||| | |||||||| || ||||||| || |||| || Sbjct 40132 GGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTC 40073 Query 58074 AGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 ||||| || ||||| | || || || || || |||||||| ||||| || || | || Sbjct 40072 AGCAATGAATTGATCTGTCGTGATGAAGGCCTTCATACTGACTTTGCTTGTCT--TTTAT 40015 Query 58134 TCTCACATTGTC--AATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGG 58191 | | ||| || || || | | || ||| || ||| || ||| || || | Sbjct 40014 TTACCCATCTTCGTAAGCGTCCTAGCCAAGAACGCGTCAAGGATATCATCTTGGAAGCTG 39955 Query 58192 TCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACA 58251 || || ||| | || ||| | || || || || || || || | |||| ||||| Sbjct 39954 TCAGCATTGAACAGGAATTTTTGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATT 39895 Query 58252 ATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GAT 58309 || ||||||| | ||||| || || ||||| || | || || | | || ||| Sbjct 39894 CTGCCTTGATGTGCCAATACATCGAATTCGTTGCTGATCGCCTCATGGTTGCTCTTGGAT 39835 Query 58310 TGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGA 58369 | || | | ||||| | | ||||| ||||| |||||| | ||||||| || | Sbjct 39834 TCGACAAGAT--TTACATGGCTACCAATCCATTTGACTTTATGGACATGATCTCTCTTCA 39777 Query 58370 GGGCAAGACAAACTTTTTCGAAAA 58393 |||||||| ||||| || ||||| Sbjct 39776 AGGCAAGACCAACTTCTTTGAAAA 39753 >seq4 Length=1094480 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || ||||| || || || || || || || | || |||||| | || Sbjct 349432 CATGCAAATCTTTGTCAAGACACTTACTGGAAAGACAATTACTTTAGAAGTTGAATCTTC 349491 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| | || ||||| | || ||||||||||| | || || || || Sbjct 349492 TGACACTATCGACAATGTAAAACAAAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCA 349551 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || ||||| ||||| | ||||| ||| | ||||| ||||| Sbjct 349552 ACAACGTCTCATCTTTGCTGGTAAACAACTCGAAGATGGCCGTACTCTAAGCGACTATAA 349611 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| ||||| ||||| |||||||| |||| ||| | || | || |||| Sbjct 349612 CATCCAAAAGGAATCTACTCTTCACTTGGTCCTTCGTCTCCGTGGTGGTA 349661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445758677097120