Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq107 136 8e-27 >seq107 Length=77526 Score = 136 bits (150), Expect = 8e-27 Identities = 301/447 (67%), Gaps = 7/447 (2%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||||||||||||||| || ||||| |||||||| |||| | || || |||||||| | Sbjct 40170 TTGTTGCCTTTGCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATTTTTT 40111 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | ||| | |||||||| | || | | |||||| || || | | | | Sbjct 40110 GGCTCAAGAAACGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTG 40051 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | ||||| |||||| |||||||| || | | || | | || || || Sbjct 40050 ATGAAGGCCTTCATACTGACTTTGCTTGTCTTTTATTTACCCA--TCTTCGTAAGCGTCC 39993 Query 102096 CATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTC 102155 | | | |||| | | || || || ||||| ||| | |||||||| |||||| Sbjct 39992 TAGCCA-AGAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTT 39934 Query 102156 TCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAA--CTGCAAGTTGATGAGCCAGTA 102213 | || | | | || || ||| | | || ||||| |||| |||||| |||| || Sbjct 39933 TGACGGATGCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGC--CTTGATGTGCCAATA 39876 Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGT 102273 ||| ||||| || || ||| || |||||| | ||| | || ||| || | | Sbjct 39875 CATCGAATTCGTTGCTGATCGCCTCATGGTTGCTCTTGGATTCGACAAGATTTACATGGC 39816 Query 102274 TACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGA 102333 |||||| || || || ||||||| || || || | ||||||||||| ||||| Sbjct 39815 TACCAATCCATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGA 39756 Query 102334 AAAGAGAGTCGCCGAGTATCAACGTGC 102360 |||| | ||| | || ||||||||||| Sbjct 39755 AAAGCGTGTCTCTGACTATCAACGTGC 39729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989566426843630