Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 >seq1 Length=2399970 Score = 120 bits (132), Expect = 2e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || |||||||| ||||| ||||| || | | | | ||||||| | |||| Sbjct 342547 TGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTACGACCGTCTTCGAGTTGT 342488 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || |||||| | || | |||||||||||| || || ||||| || || ||| || Sbjct 342487 TTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCTTCCTTATCTTGAATCTTT 342428 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| ||| |||| || ||||| | || || || ||||| ||||| ||||| || Sbjct 342427 TGCTTGACATTTTCAATACTATCGGAAGACTCAACTTCCAAGGTGATGGTCTTACCAGTA 342368 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 ||||| || ||||| ||||||||| Sbjct 342367 AGAGTCTTGACAAAGATTTGCATA 342344 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268 ||||| | |||||| |||||| | || | |||||| ||||| ||||| ||||| ||| Sbjct 342029 TCTTCAAGTTGTTTACCAGCGAAAATAAGACGTTGCTGGTCAGGAGGAATACCTTCCTTG 341970 Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328 || || || ||| ||| |||| || | || ||| || ||||||||||| Sbjct 341969 TCTTGGATCTTTTGCTTGACATTTTCGATACTNTCAGAATTACGAACTTCTAAGGTAATA 341910 Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||||| || ||||| || ||||| ||||||||| Sbjct 341909 GTTTTACCAGTAAGAGTCTTGACAAAGATTTGCATA 341874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362173082114226