Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq4 181 2e-40 >seq4 Length=1094480 Score = 181 bits (200), Expect = 2e-40 Identities = 358/526 (68%), Gaps = 4/526 (1%) Strand=Plus/Plus Query 193645 CTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGT 193704 |||| | || ||||||| |||||| |||||| || || || ||||| ||| |||| | Sbjct 432774 CTGAAGTTTACAATCTTGCAGCTCAATCTCATGTCAAGGTCTCTTTTGACATGTCAGAAT 432833 Query 193705 ATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGG 193764 |||| | | || || ||| | || || ||| | ||||||| || | |||| ||| Sbjct 432834 ATACCGGTGACGTCGACGCTCTTGGCACACTTCGTTTACTTGATGCTATCCGTAC-TTGT 432892 Query 193765 GAATGGA--GAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGT 193822 | | | || | |||||| ||||||| || |||||| ||||| |||||| || Sbjct 432893 GGTTTAACCGATCG-TGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGT 432951 Query 193823 TCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGC 193882 | | || || | | ||||| ||||| || |||| || || |||||||||||||| Sbjct 432952 AGTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGC 433011 Query 193883 AAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAG 193942 ||| | |||||||||||||| | || || ||||| ||||| | || | Sbjct 433012 CAAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTG 433071 Query 193943 TTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAA 194002 | ||||||||||||||| || ||||| || | | || || || || || || || Sbjct 433072 TAATGGTATTCTCTTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAA 433131 Query 194003 GATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTATCTTGGTAA 194062 |||||| | | | | | | ||| | ||| || || |||||||| ||||| Sbjct 433132 GATTACTCGTGCTGTCGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTAA 433191 Query 194063 TCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAAT 194122 | || |||||||| | ||||||||||| || |||||||| |||| |||||| | || Sbjct 433192 TATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCAT 433251 Query 194123 GTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 | |||| || ||| | || | |||| || | ||||| |||||| Sbjct 433252 GCTGCAGCAAGATCAGCCTCAAGATTTCGTCTTGGCTACTGGTGAA 433297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807541209106160