Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq17 105 1e-17 >seq17 Length=565816 Score = 105 bits (116), Expect = 1e-17 Identities = 302/462 (65%), Gaps = 12/462 (3%) Strand=Plus/Plus Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| || || ||||| |||| | |||||||||||| || || |||||||| || | ||| Sbjct 455664 CCAATCACCACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGCATAGAA 455723 Query 245044 GAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101 || || | | ||||| ||||| |||| ||| || | || || |||||| Sbjct 455724 CAGATCGC--GAGCTCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAGGTG 455781 Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161 || | ||| | |||||||| |||| ||| | |||| ||||| || || || || || Sbjct 455782 AAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGTTTATTACCG 455841 Query 245162 CCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217 || || || | | | ||||| |||||| | || || | |||| || || Sbjct 455842 CCTTGATCGA----CATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAATCC 455897 Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGA 245277 ||| |||| ||||||||||| || || | || | | | | |||| ||| Sbjct 455898 GTTGGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTT 455957 Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 || ||| | ||||| || ||||||||| | || ||| | |||| || || || Sbjct 455958 CAAGCCAATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGAT 456017 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397 || || || || ||||||| |||||| ||||| || |||| ||||| || Sbjct 456018 ACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGG 456077 Query 245398 GCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| | || || ||||| || || ||||| || ||||| Sbjct 456078 TGTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTA 456119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944322839323360