Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq14 150 4e-31 seq3 123 5e-23 seq107 120 7e-22 seq41 87.8 4e-12 seq10 87.8 4e-12 >seq14 Length=659637 Score = 150 bits (166), Expect = 4e-31 Identities = 681/1053 (65%), Gaps = 41/1053 (4%) Strand=Plus/Minus Query 333321 TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCC 333380 |||||||| | | ||||||||||||||||| | ||| || || |||| | ||| Sbjct 83923 TCTTCACCAGTGTGGTAACGCCATTGGATATATTCGTTAGGGGTTTTGTCCAAGTGACGT 83864 Query 333381 TCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 333440 ||||| |||||||||||||| || || || || |||| ||||| || ||||| |||| Sbjct 83863 TCGATATGGTGGAAAGCATGTTGAGCGACATAGGCAATACGCAAGTTAGGATGTCTCCAG 83804 Query 333441 ACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTCCC 333500 ||| | || || || |||| || || | || ||| || | || || || Sbjct 83803 ACAGTACCAACCTCGGACTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTACCA 83744 Query 333501 GCACCATTTTCGCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTG 333560 ||||| || ||| | || ||| | |||| || || || | |||| | | || Sbjct 83743 GCACCGTTGGGGCCAATGACGGCAACACGGGAGGCAAGAGA-ACAT-TGCATGGA-GATG 83687 Query 333561 TCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATG 333617 |||| | | | || || | ||| ||||||| ||| | || | ||||| | Sbjct 83686 TCAATCAGTTGCTTGCGGTCAGAACCAGGATACTGGAAATCGACGTTCTTCATCTTCAAG 83627 Query 333618 ATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTG 333677 || ||||| ||||| | ||||||| || | ||| || ||||| ||||| || || Sbjct 83626 ATTGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAGAGAACTTG 83567 Query 333678 GTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTG-ATTCGGGACGCTTCTTCACGAACTC 333736 | | || | | || ||||||| || | | ||||| |||||| ||||| || Sbjct 83566 ATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGGAC-CTTCTTGACGAATTC 83508 Query 333737 GGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGT 333796 ||||| || |||||||| ||| ||||| ||| || ||||| || || || || Sbjct 83507 GGACAAGTTACCCTTGTAGCGCTTGAGCTTATAGTTGGGCTCGTAGTGAATGATGTCGGA 83448 Query 333797 GCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAG 333856 || ||| || | ||| || |||||||| || ||||| | | | ||| ||| | Sbjct 83447 ACAGACATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATAGAGGTAACAGTCTTCAA 83388 Query 333857 GTTGATCAGGTATTCAATCAGCCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGCT 333915 | ||||| | |||||| ||||| ||| ||| | || ||||| || | Sbjct 83387 ACCAAGAAGGTAGTTCTCCAGCCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGTT 83329 Query 333916 CGT-CAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATT 333974 ||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || ||||| Sbjct 83328 CGTCCAACAAG-AGGATATCAGCGTTCATCAACATAGCACGGGCAAGAGCAAGCTTCATC 83270 Query 333975 TTCCACCCTCCTGAAAGAGTGTT----AATTGGGGCAGATTGGCGCTCAAT--ATCA--- 334025 ||||| || || |||| ||| ||| | || |||| || | ||| Sbjct 83269 TTCCAACCACC----AGAGAGTTCACCAAT--AGCCATCTTGGTAACCATTTGTTCAGAG 83216 Query 334026 AAGCCAACCGATT-CTAGAGTA-GTTACGATCTT-TTCACGAGACCAAATGTTTTCCTTT 334082 |||||| ||| | |||| | || ||| ||| |||| | | || || | || Sbjct 83215 AAGCCA---TATTCCAAGAGGATCTTGCGAACTTCTTCA-GGGTCC--TTGGTCTCAACA 83162 Query 334083 ACTTGTTCATCATTGGCAATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGAGA 334142 ||| | || | || ||||||| | || | | || ||||| || |||| Sbjct 83161 CCTTCGGAAGCAAGG---ATAAAGTCAACCAAAGGAGTATCAGCTTCGGAACCATCGATG 83105 Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 |||||||| ||||| |||| || | || || ||||| ||||| | ||| || Sbjct 83104 TCGTGTTCGACGTAGACAGTCTTGAGTTCAGAGCGAGGAGGGAAGCCTTCGACCTGTTCG 83045 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || |||| || ||||| ||||| || ||||| || || | ||||| ||||| || Sbjct 83044 TTGGCAATGGCACGCATGAGAGTAGACTTACCACAACCATTGGCGCCACAGAGACCATAA 82985 Query 334263 CGGTTTCCACGCTTCAGATTGAACCG-CGTATTGTTCAGAAGAATTTTTCCACCATATGC 334321 || |||||||| ||| ||| | ||| ||| || | || || ||||||| || Sbjct 82984 CGACGACCACGCTTGAGA-CGAAGAGAGGTACGGTTAAGCAAGATCTTGGCACCATAAGC 82926 Query 334322 CAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||| |||||||| | ||| ||||| ||||| Sbjct 82925 AAGAGAGAATTCACAGTTACAAAGATCTTCACC 82893 Score = 120 bits (132), Expect = 7e-22 Identities = 175/245 (71%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 332805 TGACTAATGATCACGACACCTCCACCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGA 332864 ||| ||| ||| || ||||| |||||| | | ||| | || |||| || || ||| Sbjct 84445 TGAGTAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCAAGA 84386 Query 332865 CTCTCACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCA 332923 ||||| || | | ||||| |||||||| | ||| | || ||| ||| |||| ||| Sbjct 84385 GATTCACGATCCAAATAATTGGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCA 84327 Query 332924 TAGAGCAGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGA 332983 | |||||| || || ||||| || | |||||| || ||||| || ||||| || ||||| Sbjct 84326 CATAGCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGGCCACGGATACGAGA 84267 Query 332984 ATGAGTTGTAAATTCAGGGTCGAGACCAACATTTGCCATATGTTCTTCCACGTTCTTTGC 333043 |||||| | ||||| || || |||||||| | |||| || | ||| | | ||| || Sbjct 84266 ATGAGTAGCGAATTCGGGTTCAAGACCAACTTCGGCCAAGTGCTTTTCAATTTCCTTGGC 84207 Query 333044 GGTCA 333048 |||| Sbjct 84206 AGTCA 84202 >seq3 Length=1262620 Score = 123 bits (136), Expect = 5e-23 Identities = 1002/1595 (63%), Gaps = 87/1595 (5%) Strand=Plus/Minus Query 332805 TGACTAATGATCACGACACCTCCACCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGA 332864 ||| ||| ||| || ||||| |||||| | | || | || |||| || || ||| Sbjct 915742 TGAGTAACGATGACAACACCACCACCATATTCTTTGATAGCAGTAGCCAAAGCACCAAGA 915683 Query 332865 CTCTCACGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCA 332923 ||||| || | | ||||| |||||||| | ||| | || ||| ||| |||| ||| Sbjct 915682 GATTCACGATCCAAATAATTGGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCA 915624 Query 332924 TAGAGCAGCGCCGATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGA 332983 | |||||| || || ||||| || | |||||| || ||||| |||||||| || ||||| Sbjct 915623 CATAGCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACGAGA 915564 Query 332984 ATGAGTTGTAAATTCAGGGTCGAGACCAACATTTGCCATATGTTCTTCCACGTTCTTTGC 333043 ||||| | ||||| || || |||||||| | || | || | ||| | | ||| || Sbjct 915563 GTGAGTAGCGAATTCGGGTTCAAGACCAACTTCAGCTAAGTGCTTTTCGATTTCCTTGGC 915504 Query 333044 GGTCAGTGGCTTGAACATACCGTTTGCGACGGCTTCTTTGGTGTCAATGTCGTTCAGAAG 333103 |||| || | | ||| | | | ||||| | || | ||||| | Sbjct 915503 AGTCAAAGGACGGTTGAGACCCATCTTGGCAGCTTCAGCAGCATCGAC----TTCAGCAA 915448 Query 333104 TTTTC----CGAAACCATACTCCTCGAGGCGTTCG--CGAGATATCCATTGGGTAGTCTC 333157 | ||| ||||||| || || || || | ||||| ||||| ||| | || Sbjct 915447 TCTTCTTACCGAAACCCATTTCTTCAAGC--TTGGAACGAGAGATCCA---GGTGTTGTC 915393 Query 333158 ATC-GTTTTTCCACTGAACC--------TCGTACTCGTAAGATTTTTTCAGCTTGCGGCG 333208 | | | | || || || ||||| ||||| |||| || ||||| || || Sbjct 915392 AACAGAGGAGCGACCGACCCAAGAGACTTCGTATTCGTAGGATTGCTTGAGCTTACGACG 915333 Query 333209 ACCAAGAATCTTGTCAAGAA-----TTTTC---TTCACTCCGTCAACGACTTTAGTGTCA 333260 ||||| ||| |||| || ||||| |||| || ||| ||||| || Sbjct 915332 ACCAACAATAGCTTCAACAACACGCTTTTCACCTTCAATCA--CAAAGACTT----GT-- 915281 Query 333261 TACATCTTCTTTAGTTCTTCTTCGTTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTTTG 333320 | ||| |||| | | ||||||| ||| || | | || || || Sbjct 915280 TCCATGGCCTTTTGGTTTTCTTCGGCGTTGTTACGTTCATTCTTTTCGAGTTCTTCACGA 915221 Query 333321 TCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCC 333380 |||||||| | | ||||||||||| || || | |||||| || |||| | ||| Sbjct 915220 TCTTCACCAGTGTGGTAACGCCATTGAATGTATTCGTTGGGGGTTTTGTCCAAGTGACGT 915161 Query 333381 TCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAA 333440 |||||||||||||||||||| || || || || |||| ||||| || ||||| |||| Sbjct 915160 TCGATGTGGTGGAAAGCATGTTGAGCAACATAGGCAATACGCAAGTTAGGATGTCTCCAG 915101 Query 333441 ACACTTCCGTTGGTGGCTTCCATTTGCCCCGTGAGCACCTTAATGAGAGTGCTTTTTCCC 333500 ||| | || || ||| |||| || || | || ||| || | || || || Sbjct 915100 ACAGTACCAACCTCGGATTCGATTTCACCAGTCAACAACTTGATCAAGGTAGACTTACCA 915041 Query 333501 GCACCATTTTCGCCTACCACACCAATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTG 333560 ||||| || || | || ||| | ||| || || || | |||| | | || Sbjct 915040 GCACCGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATGGA-GATG 914984 Query 333561 TCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATG 333617 || | | | | || || | ||| || || | ||| | || | ||||| | Sbjct 914983 TCGATCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTCAAG 914924 Query 333618 ATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTG 333677 || ||||| ||||| | ||||||| || | ||| || || || ||||| || | Sbjct 914923 ATAGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGTTCAGGGAAAGAGAACTTA 914864 Query 333678 GTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCG 333737 | | || | | || ||||||| || | ||| |||||| ||||| ||| Sbjct 914863 ATTTGAGTAGCTTCCAAGGAGTAGTAAGAGGCAGCACGAGGAACCTTCTTGACGAATTCG 914804 Query 333738 GACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG 333797 |||| || ||||| || ||| ||||| ||| || ||||| || || || || Sbjct 914803 GACAAGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGCTCGTAGTGAATGATGTCGGAA 914744 Query 333798 CAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG 333857 || ||| || | ||| || |||||||| || ||||| | | | | ||| ||| | Sbjct 914743 CAGACATGATCCAAGAAACCAGAGTCGTGGGAAACAATGATGGAGGTAACAGTCTTCAAA 914684 Query 333858 TTGATCAGGTA----TTCAATCAGCCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCG 333912 | ||||| | ||| ||| || ||||| ||| ||| | || ||||| | Sbjct 914683 CCAAGGAGGTAGTTTTCCAACCAGGCA----ACGTT-GACAACATCCAAGTGATTGGTAG 914629 Query 333913 GCTCGT-CAAGAAGTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTC 333971 | |||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || ||| Sbjct 914628 GTTCGTCCAACAAG-AGGATATCAGCGTTCATCAACATGGCACGGGCAAGAGCAAGCTTC 914570 Query 333972 ATTTTCCACCCTCCTGAAAGAGTGTT----AATTGGGGCAGATTGGCGCTCAAT--ATCA 334025 || ||||| || || |||| ||| ||| | || |||| || | ||| Sbjct 914569 ATCTTCCAACCACC----AGAGAGTTCACCAAT--AGCCATCTTGGTAACCATTTGTTCA 914516 Query 334026 AAGCCAACCGATT-CTAGAGTA-GTTACGATCTTTTCACGAGACCAAATGTTTTCCTTTA 334083 || | | ||| | |||| | || || | || | || | || || | Sbjct 914515 GAGAAACCATATTCCAAGAGAATCTTGCGGAC-TTCCTCGGG-------GTCTTTGGTCT 914464 Query 334084 CTTGTTCATCATTGGCA---ATGAAGTCAATGATAGCCATGTTAGAATCGGACCCGTCGA 334140 | | || |||| |||||||||| | || | | || ||||| || || | Sbjct 914463 CAACACCTTCGGAGGCAAGGATGAAGTCAACCAAAGGAGTATCAGCCTCGGAACCATCAA 914404 Query 334141 GATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGAC 334200 ||||||||| ||||| |||| || | || || ||||| ||||| | ||| Sbjct 914403 TATCGTGTTCGACGTAGACAGTCTTGAGTTCAGAACGAGGAGGGAAACCTTCGACCTGCT 914344 Query 334201 CGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGT 334260 |||| |||| || ||||| ||||| || ||||| || || | ||||| ||||| | Sbjct 914343 CGTTGGCAATGGCACGCATAAGAGTAGACTTACCACAACCATTGGCACCACAGAGACCAT 914284 Query 334261 AGCGGTTTCCACGCTTCAGATTGAACCG-CGTATTGTTCAGAAGAATTTTTCCACCATAT 334319 | || |||||||| ||| ||| | ||| ||| || | || || ||||||| Sbjct 914283 AACGACGACCACGCTTGAGA-CGAAGGGAGGTACGGTTAAGCAAGATCTTGGCACCATAA 914225 Query 334320 GCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 || ||||| || ||||| | ||| ||||| ||||| Sbjct 914224 GCAAGAGAGAACTCACAGTTACAGAGATCTTCACC 914190 >seq107 Length=77526 Score = 120 bits (132), Expect = 7e-22 Identities = 143/194 (74%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || || |||||||| |||| | ||| | || |||||||||||||| || || ||| | Sbjct 39910 CTCATCGGCATGAATTCTGCCTTGATGTGCCAATACATCGAATTCGTTGCTGATCGCCTC 39851 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || ||||| | || || | |||| | | || || |||| ||||||||| Sbjct 39850 ATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTACCAATCCATTTGACTTTATGGAC 39791 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 | || || |||||||| || || |||||||| |||||||||||| ||| |||||||| Sbjct 39790 ATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCTGACTATCAACGT 39731 Query 243742 CCTGGTGTGATGAA 243755 ||||||| ||||| Sbjct 39730 GCTGGTGTCATGAA 39717 >seq41 Length=201167 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 333320 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 333379 ||||||||| | ||||||||||| || || || | ||| || ||| | || | || | Sbjct 103311 GTCTTCACCAGTAGCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTG 103370 Query 333380 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 333439 |||||||| ||||| ||||| || || ||||| |||| ||| | ||| || |||||||| Sbjct 103371 TTCGATGTGATGGAAGGCATGTTGAGCAACGTAGGCAATACGTAAATTGGGGTGCTTCCA 103430 Query 333440 AAC 333442 || Sbjct 103431 TAC 103433 >seq10 Length=783822 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 333320 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 333379 ||||||||| | ||||||||||| || || || | ||| || ||| | || | || | Sbjct 589948 GTCTTCACCAGTAGCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTG 590007 Query 333380 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 333439 ||||||||| ||||| || || || || || || |||| ||| | ||| ||||||||||| Sbjct 590008 CTCGATGTGATGGAAGGCGTGTTGAGCAACATAGGCAATACGTAAATTGGGATGCTTCCA 590067 Query 333440 AAC 333442 || Sbjct 590068 TAC 590070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102860414919100