Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq47 107 2e-18 >seq47 Length=189370 Score = 107 bits (118), Expect = 2e-18 Identities = 421/654 (64%), Gaps = 6/654 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||||| |||||||| || || || |||||||||||||| || ||| Sbjct 153537 AAGTACAACTTCTTTGGTTTCAAAACCCTCGAACGTTCTTACCTCCTCAAGATTGACGGC 153478 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || | || || || || || || | ||||| || || ||||| || || || | Sbjct 153477 AAGATTGCTGAACGTCCTCAACATTTGATTATGCGTGTTGCGATCGGTATCCATGGAACC 153418 Query 93835 GACAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGG-TATACCATGG 93892 || || | | | | ||| | | | || ||| || |||| | ||| | Sbjct 153417 GATATTGATGCAGCTATTGAGA-CATACAACTTGATGTCTGA-AAGATACTTTACACACG 153360 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | | || || || || || || || || || || ||||||||||| || ||| || Sbjct 153359 CTAGTCCTACTCTATTTAATGCAGGCACACCTCGTCCCCAGATGTCTTCTTGCTTCTTGC 153300 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | || | |||| || || ||| || || | || | ||||| |||||| | Sbjct 153299 TCACCATGAAGGAAGATTCGATCGAAGGTATCTATGAGACGCTCAAAATCTGTGCTCAAA 153240 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || || || || || || | | | ||| || | ||||| || || || | Sbjct 153239 TCTCCAAGACAGCAGGTGGTATTGGCTTGAACATTCACAACATTCGTGCTAGTGGATCAT 153180 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||| ||||||||| || ||||||||| || | || |||||||| || ||||||| Sbjct 153179 ACATTGCCGGTACCAACGGTTACTCCAACGGACTATTGCCCATGCTCCGTGTTTTCAACA 153120 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 | |||| || || || || || || ||| | | | ||| | ||||| | || Sbjct 153119 ATACGGCTCGTTATGTCGATCAAGGCGGTAATAAGCGTCCGGGCGCATTCGCAATGTACT 153060 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | || |||||||| || || | | || | ||| | ||||| ||| ||||| | Sbjct 153059 TGGAACCCTGGCATGCAGATATTTTCACCTTTTTAGACTTACGAAAAAACTTTGGCAAAG 153000 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | || || | || || ||||| ||||||||| | || || ||||| ||| | | Sbjct 152999 ACGAAATCAGAGCTCGTGATCTGTTCTATGCTCTCTGGATTCCTGATCTTTTCATGCAGC 152940 Query 94313 GCGTCGAGAAAAACT-CCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGA 94365 | ||| ||| | | | ||| ||| ||||||||||||||| ||| ||| Sbjct 152939 GTGTC-AGAGACGGTGGTGATTGGTCTCTGTTTTGTCCCAATGAAGCTCCTGGA 152887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714628920560