Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17 205 1e-47 seq47 165 1e-35 seq345 120 4e-22 seq107 102 1e-16 seq16 102 1e-16 >seq17 Length=565816 Score = 205 bits (226), Expect = 1e-47 Identities = 877/1374 (64%), Gaps = 24/1374 (2%) Strand=Plus/Plus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 ||| | ||||| ||||| || ||||| ||||||||| ||| | ||||| | ||||| Sbjct 454833 ATAAAAGTTGGATGTGTAAGGTTCAAAACACTCATTGAAACCGAGCATTTGAGAAGTGGA 454892 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021 || || ||||| || || | || || ||| |||| ||| | ||| ||| Sbjct 454893 AGCAGTAGGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTC 454952 Query 116022 CTTGAGGGCGTCCCAGTCGTAG---TTG--AGCTTTGTCTCCCCCTCCCACATATCAAAC 116076 |||||| ||| ||||||| || ||| || | || | | |||||| || | Sbjct 454953 CTTGAGTGCGGCCCAGTCCCAGAGATTGGTAGGTGTGACA-----TTCCACATGTCGTAT 455007 Query 116077 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 116136 || |||||||| | ||| | || || ||| | || || || || || | || Sbjct 455008 TGCAGGATACCCTTGGATACAGGACTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCA 455067 Query 116137 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTC 116196 ||||| ||| || || || | ||| || || || || || ||||| || || ||| Sbjct 455068 GCCAACTCGCAGGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTC 455127 Query 116197 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAG 116255 | |||||| || ||||| || | || | | | | || || || || | Sbjct 455128 AGCTGCTTGGCTTCAGGTGAATCGAATG-GATAGCGAAGAGCCATGAAAGTGTCGGCTAA 455186 Query 116256 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCA 116314 ||||| ||||| | ||||| || | ||||||| | || || |||||| || | Sbjct 455187 GCCTTGAACACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGA 455245 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 | || || |||| ||||||| | | | || | ||| | |||| |||||| || | | Sbjct 455246 CAGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACAT 455305 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT-TCATTGACATACTTAGGAAGGGCG 116433 | || || |||| | ||||| | | ||||| | | | ||||| |||| || || Sbjct 455306 CGTGCAGTTTTTGGAAATCATACTTT----TCTCTATTAATCACATAGGTAGGCAGAGCA 455361 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || |||| ||||| |||| | || || | | ||| || | |||||| ||| Sbjct 455362 ATGGAGGCCAAGTTACAGACAGCGACTTCGTCAGGACTCGAGTATTCAACAATTTCTGTA 455421 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 |||| || | || || || |||||||| | ||||| |||| ||||||| ||| Sbjct 455422 CACAGGTTGCTGCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCA 455481 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAT 116613 ||||| ||||| || | || | || ||||||||||| | || | ||| || | ||| Sbjct 455482 TCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCCTCCAAAATGGCATACCAC 455541 Query 116614 A-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672 | | | | | || | | || | | |||| || || ||||| ||| ||||| Sbjct 455542 AGCTTTTGAGCCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAG 455600 Query 116673 GGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732 || ||||||| |||||| | || | || || |||| || ||||| || || Sbjct 455601 AGCAACAAACTCATCACCCCAAATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAG 455660 Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 |||||| | |||||| || || |||| ||||||||| || || |||||||| || | Sbjct 455661 AGACCAATCACCACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGCATA 455720 Query 116793 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 116852 ||| ||||| ||| | ||| || | || || ||||| || |||||| Sbjct 455721 GAACAGATCGCGAGCTCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAGGT 455780 Query 116853 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACC 116909 | || || || ||||| ||||||| ||||| |||| || ||| || | ||| Sbjct 455781 GAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGTTTATTACC 455840 Query 116910 AGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATC 116969 | || | ||||| | ||||| ||| || || || ||||| || | | || | Sbjct 455841 GCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAATCCGTT 455900 Query 116970 AGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCAT 117029 || | || || || || |||| || | || | | | ||| |||| || Sbjct 455901 GGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTCAA 455960 Query 117030 ACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCC 117089 ||||| || ||||| ||| |||||||| || || |||| | | ||||| || Sbjct 455961 GCCAATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACC 456020 Query 117090 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 117149 |||||||| || |||| | | || | |||||| |||||||| || | ||||| Sbjct 456021 TTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGGTGT 456080 Query 117150 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTA 117209 || || || || || || || | ||||| |||| | || ||||||| | ||| Sbjct 456081 GCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTATCTTTCGGACATCAAGTTGTA 456140 Query 117210 GGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCAT 117263 ||||| | | | ||| || || || |||||||||| || ||||| Sbjct 456141 TGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATTGCAACACGCAT 456194 >seq47 Length=189370 Score = 165 bits (182), Expect = 1e-35 Identities = 602/932 (65%), Gaps = 18/932 (2%) Strand=Plus/Plus Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA-CTTTCGAGCGGTCTCCAC 116315 ||||| ||||| | ||||| || | |||||| | || || |||||| || || Sbjct 152441 CCTTGAACACCTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGAC 152499 Query 116316 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 116375 || || |||| ||||||| | | | || | ||| | |||| |||||| || | || Sbjct 152500 AGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATC 152559 Query 116376 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGA---CATACTTAGGAAGGGC 116432 || || |||| | ||||| | | ||||| ||||| |||| |||| || || Sbjct 152560 GTGCAGTTTTTGGAAATCATACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGC 152613 Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492 || || |||| ||||| |||| | ||||| | | ||| || | |||||| || Sbjct 152614 AATGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGT 152673 Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552 ||||| ||| | ||| || || |||||||| | ||||| |||| ||||||| || Sbjct 152674 ACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGC 152733 Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||| ||||| || | || | || ||||||||||| | | | ||| || | ||| Sbjct 152734 ATCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCA 152793 Query 116613 TA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGA 116671 || | | | | || | | || | | |||| || || ||||| ||| |||| Sbjct 152794 TAGCTTTTGAGCCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGA 152852 Query 116672 GGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 | || ||||||| |||||| ||| || | || || || | || ||||| || Sbjct 152853 GAGCAACAAACTCGTCACCC-CAGATTTCATGTAATCCAGGAGCTTCATTGGGACAAAAC 152911 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 |||||||| | |||||| || || |||| |||||| || || || |||||||| || Sbjct 152912 AGAGACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCA 152971 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 |||| ||||| ||| | ||| || | || || || || || |||||| Sbjct 152972 TAGAACAGATCACGAGCTCTGATTTCGTCTTTGCCAAAGTTTTTTCGTAAGTCTAAAAAG 153031 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGA 116907 | ||||| || ||||| ||||||| ||||| |||| || ||| || | | Sbjct 153032 GTGAAAATATCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTA 153091 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 || | || | ||||| | ||||| ||| || || || ||||| || | | || Sbjct 153092 CCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAGTCCG 153151 Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGC 117027 | || | || || || || ||| || | || | | | ||| |||| | Sbjct 153152 TTGGAGTAACCGTTGGTACCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTC 153211 Query 117028 ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATC 117087 | |||||||| ||||| ||| |||||||| || || |||| | | ||||| Sbjct 153212 AAGCCAATACCACCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATA 153271 Query 117088 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGT 117147 || |||||||| || |||| | | || | |||||| ||||| || || | ||| Sbjct 153272 CCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGT 153331 Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 || || || || || || || || | ||||| Sbjct 153332 GTGCCTGCATTAAATAGAGTAGGACTAGCGTG 153363 >seq345 Length=25863 Score = 120 bits (132), Expect = 4e-22 Identities = 211/305 (69%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678 ||| ||| | |||| ||| |||||||| ||||||||||| || | ||| ||| |||| Sbjct 12249 AGTCGATAAAGTTGATGATCAGACCCTTGATGTGTGAACCGTCATGATCTTGATCTGTCA 12308 Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738 | ||||| | || ||||| || | ||| |||| || ||| | ||||| || |||| Sbjct 12309 TGATCATCAAACGGCCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 12368 Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798 |||| | ||| ||||| | |||| ||||| ||| |||||| || ||| Sbjct 12369 GACCAAGAATAGCCTTGATGTTTTTGATCTCTTCATTTTTCATGAGTTCAGCATTAGAAA 12428 Query 176799 CGTCGCGGACATTTTTACA-CTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCA 176857 |||| ||||| || ||| || || |||| ||||| ||||| |||| |||||||| Sbjct 12429 CGTCACGGAC-GTTCAACAGTTTACCACGGATGGGGAATACACCATAGTAGTCACGACCC 12487 Query 176858 ACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGC 176917 || || || | |||| | | || | ||| || |||||||| || || | ||| || Sbjct 12488 ACTACTGACATACCACTCAAAACAAGCGACTTGGCTGAATCACCTTCTGTGATGATCAGA 12547 Query 176918 GTACA 176922 || || Sbjct 12548 GTGCA 12552 >seq107 Length=77526 Score = 102 bits (112), Expect = 1e-16 Identities = 284/433 (66%), Gaps = 7/433 (2%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || || || || || ||||| |||| | |||||| ||| || ||| Sbjct 40025 AGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACC 40084 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| | ||| || ||||| | ||| ||||| | | ||| || |||||||||||||| Sbjct 40085 AGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAACCAGAGAAGAAGAT 40144 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA 127698 || || ||| || || |||| |||||||| ||||| || | | || | || Sbjct 40145 ACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCG---TTAGAGGAAAT 40201 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAA 127758 |||||| | ||||| | |||||| | | |||||| |||| || | || || ||| Sbjct 40202 CCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGTCAATAGCAGAAAA 40261 Query 127759 GAGTTCCTTCTTTTCTGATGG--ATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 ||| | || ||||| ||| ||||||||| || | || || | || ||| Sbjct 40262 GAG--CATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTT 40319 Query 127817 TCGCCGTGGACCATTTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876 || |||| | ||||| | | ||| | | |||||| | ||||| ||| Sbjct 40320 TCTGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTCAGGAATC 40379 Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 | || ||||| ||| || | | | || ||| |||||| ||||| || |||||| Sbjct 40380 TTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCATCTGAACCAGCA 40439 Query 127937 AAAAACGCCAGGA 127949 || || |||| || Sbjct 40440 AAGAAGGCCAAGA 40452 >seq16 Length=608225 Score = 102 bits (112), Expect = 1e-16 Identities = 205/304 (67%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 176619 AGTGGATCATATTGAGGATGAGACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCA 176678 ||| ||| | |||| ||| |||||||| || ||||||||||| | ||| ||| |||| Sbjct 527047 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 526988 Query 176679 TAATCATGAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACCTTGTTGAA 176738 | ||||| | |||||||| || | ||| |||| || ||| | ||||| || |||| Sbjct 526987 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 526928 Query 176739 GACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTGCGCCACTGAAG 176798 |||| | ||| ||||| | |||| |||| || |||||| || ||| Sbjct 526927 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 526868 Query 176799 CGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAA 176858 | || || || || || || || | ||||| ||||| |||| |||||||||| Sbjct 526867 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 526808 Query 176859 CCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCG 176918 | || || | |||| | | || | ||| || |||||||| || || | || || | Sbjct 526807 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 526748 Query 176919 TACA 176922 |||| Sbjct 526747 TACA 526744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613496570987760