Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq17 262 5e-65 seq47 228 1e-54 seq345 114 2e-20 seq16 107 2e-18 >seq17 Length=565816 Score = 262 bits (290), Expect = 5e-65 Identities = 894/1375 (65%), Gaps = 26/1375 (2%) Strand=Plus/Plus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||| | ||| | ||||| |||||||| || ||||| ||| | ||||| | ||||| Sbjct 454833 ATAAAAGTTGGATGTGTAAGGTTCAAAACACTCATTGAAACCGAGCATTTGAGAAGTGGA 454892 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCG 106050 || || ||||| || || | || ||| |||||| | ||| | |||| || Sbjct 454893 AGCAGTAGGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATG---CTTGGCAATCTT 454949 Query 106051 TTCCTTGAGAACATCCCAGTCGTAGTTGA--GCTTGGTTTCACCTTCCCACATATCAAAT 106108 ||||||||| | ||||||| || || | | ||| | || |||| |||| || || Sbjct 454950 TTCCTTGAGTGCGGCCCAGTCCCAGA-GATTGGTAGGTGTGACATTCC-ACATGTCGTAT 455007 Query 106109 TGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA 106168 || || | || | ||| ||| || ||| | || || |||| || | |||| Sbjct 455008 TGCAGGATACCCTTGGATACAGGACTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCA 455067 Query 106169 GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTC 106228 ||||| || ||| || |||| || || || || |||||||||||||| || ||| Sbjct 455068 GCCAACTCGCAGGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTC 455127 Query 106229 ATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGA 106288 | || |||||||||| |||||| |||| ||||| || || || || | Sbjct 455128 AGCTGCTTGGCTTCAGGTGAATCGAATGGATAGCGAAGAGCCATGAAAGTGTCGGCTAAG 455187 Query 106289 CCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAAC 106347 ||||||||||| |||||||| ||||| |||| | | || || |||||| || || Sbjct 455188 CCTTGAACACCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGAC 455246 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 || || |||| | || |||| ||| | ||| | || | || ||| || | || Sbjct 455247 AGGGTAGTAATTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATC 455306 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCT-TCATTGACATACTTTGGAAGGGCGA 106466 || ||||||| ||||| | | ||||| | | | ||||| | || || || | Sbjct 455307 GTGCAGTTTTTGGAAATCATACTTT----TCTCTATTAATCACATAGGTAGGCAGAGCAA 455362 Query 106467 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 106526 | || ||||| || || ||||| || || | | ||| || | ||||||||||| Sbjct 455363 TGGAGGCCAAGTTACAGACAGCGACTTCGTCAGGACTCGAGTATTCAACAATTTCTGTAC 455422 Query 106527 ACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCAT 106586 ||| |||| | || ||||| ||||| || | || ||||||||| |||| || |||| Sbjct 455423 ACAGGTTGCTGCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCAT 455482 Query 106587 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA 106646 |||| ||||| ||| | || | || |||||||| || | || | ||| || | ||||| Sbjct 455483 CCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCCTCCAAAATGGCATACCACA 455542 Query 106647 -CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 106705 | | | | || | | | | | || | ||| || ||||| ||| ||||| Sbjct 455543 GCTTTTGAGCCTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGA 455601 Query 106706 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 106765 || ||||||| |||||| || | || || |||| | ||||| || ||| Sbjct 455602 GCAACAAACTCATCACCCCAAATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGA 455661 Query 106766 GACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAA 106825 ||||| | |||||| || || |||| |||||| || || |||||||| || | | Sbjct 455662 GACCAATCACCACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGCATAG 455721 Query 106826 AAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 106884 || ||||| | | | | || || || | || ||| ||| || || | || Sbjct 455722 AACAGATCGCGAGCTCTGA-TTTCGTCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAGGT 455780 Query 106885 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCC 106941 | || || || ||||| || || | || | ||||| | ||| || | || Sbjct 455781 GAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGTTTATTACC 455840 Query 106942 AGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCAT 107000 |||||| ||||| || || || ||| || || || ||||| || | |||| || | Sbjct 455841 GCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAAT-CCGT 455899 Query 107001 CTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCA 107060 || | ||| || || || |||| ||| | | || | | | || |||| || Sbjct 455900 TGGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTCA 455959 Query 107061 TCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATAC 107120 ||||| || || || ||| |||||||| ||||| | || || ||||||||| Sbjct 455960 AGCCAATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 456019 Query 107121 CGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTG 107180 | | ||| || || ||||| ||| || | ||||||| ||||| || || | |||| Sbjct 456020 CTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGGTG 456079 Query 107181 TACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGT 107240 | || ||||| || || || || | ||||| |||| | || ||||||| || || Sbjct 456080 TGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTATCTTTCGGACATCAAGTTGT 456139 Query 107241 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 ||||||| | | | |||||| || || ||||| ||||| || |||||||| Sbjct 456140 ATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATTGCAACACGCAT 456194 >seq47 Length=189370 Score = 228 bits (252), Expect = 1e-54 Identities = 734/1126 (65%), Gaps = 26/1126 (2%) Strand=Plus/Plus Query 106188 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 106247 ||| || ||||| || |||||||||||||| || |||| || |||||||||| || Sbjct 152340 CCAAGGCAGCGTGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTCAGGTG 152399 Query 106248 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 | || |||| || || || || | || || | ||||||||||| ||||||| Sbjct 152400 AGTCGAATGGATAACGAAGAGCCATGAAAGCGTCGGCTAAGCCTTGAACACCTAAACCAA 152459 Query 106308 TAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 | |||||||||| | | || || |||||| || || || || |||| | || Sbjct 152460 TCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGGTAGTAATTGATATCG 152518 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 |||| ||| | ||| | || | || ||| || | || || ||||||| ||||| Sbjct 152519 ATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGGAAATCA 152578 Query 106427 AAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 106483 | | ||||| ||||| |||| | || || || || || ||||| || || Sbjct 152579 TACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAGTTACAG 152632 Query 106484 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTA 106543 ||||| ||||| | | ||| || | |||||||||||||| ||| | ||| Sbjct 152633 ACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTGCACTTG 152692 Query 106544 ATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAG 106603 ||||| ||||| || | || ||||||||| |||| || |||||||| ||||| ||| | Sbjct 152693 ATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAAC 152752 Query 106604 GGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTAC 106662 || | || |||||||| || | | | ||| || | ||| | | | | | || | | Sbjct 152753 GGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCATAGCTTTTGAGCCTTG-AT 152811 Query 106663 AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 | | | || | ||| || ||||| ||| ||||| || ||||||| ||||| Sbjct 152812 TGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACC 152871 Query 106723 CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTC 106782 | || | || || || | | ||||| || |||||||| | |||||| || Sbjct 152872 CCAGATTTCATGTAATCCAGGAGCTTCATTGGGACAAAACAGAGACCAATCACCACCGTC 152931 Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACC 106841 || |||| ||||||||| || |||||||| || | | || ||||| | | | | Sbjct 152932 TCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCACGAGCTCT 152991 Query 106842 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 106901 || || || | || ||| |||||| || | || | ||||| || |||| Sbjct 152992 GA-TTTCGTCTTTGCCAAAGTTTTTTCGTAAGTCTAAAAAGGTGAAAATATCTGCATGCC 153050 Query 106902 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 106955 | || || | || | ||||| | ||| ||||| || |||||| |||| Sbjct 153051 AGGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCGCCTTGATCGACAT 153107 Query 106956 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATTGACCATTT 107014 | || || || ||| || || || ||||| || |||| | || | || | ||| || Sbjct 153108 AACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAGT-CCGTTGGAGTAACCGTTG 153166 Query 107015 GTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCA 107074 || || ||| ||| | | || | | | || |||| || |||||||| || Sbjct 153167 GTACCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCACCT 153226 Query 107075 GCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCC 107134 || ||| |||||||| ||||| | || || |||||||||| | ||| || || Sbjct 153227 GCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCT 153286 Query 107135 TCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAG 107194 ||||| ||| || | ||||||| |||||||| || | ||||| || ||||| || Sbjct 153287 TCCTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAAT 153346 Query 107195 AGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACA 107254 || || || | ||||| | || | || |||||| || ||||||||| | | Sbjct 153347 AGAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCT 153406 Query 107255 GAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACA 107300 | |||||| || || ||||| ||||| || |||||||||| || Sbjct 153407 GCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATAATCA 153452 >seq345 Length=25863 Score = 114 bits (126), Expect = 2e-20 Identities = 210/305 (69%), Gaps = 2/305 (1%) Strand=Plus/Plus Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221 ||| ||| | || | ||| |||||||||||||| ||||| |||| ||| |||||||| Sbjct 12249 AGTCGATAAAGTTGATGATCAGACCCTTGATGTGTGAACCGTCATGATCTTGATCTGTCA 12308 Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281 | ||||| | ||| ||||| || | ||| |||| || || | ||| || || |||| Sbjct 12309 TGATCATCAAACGGCCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 12368 Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341 |||| | || ||||| | |||| ||||| ||| |||| | || ||| Sbjct 12369 GACCAAGAATAGCCTTGATGTTTTTGATCTCTTCATTTTTCATGAGTTCAGCATTAGAAA 12428 Query 169342 CGTCGCGGACATTCTTACA-CTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCA 169400 |||| ||||| ||| ||| || ||||||| || || || ||||||| ||||| || Sbjct 12429 CGTCACGGACGTTC-AACAGTTTACCACGGATGGGGAATACACCATAGTAGTCACGACCC 12487 Query 169401 ACGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGG 169460 || || || | ||| | |||| | || ||||||||||| || |||| || || Sbjct 12488 ACTACTGACATACCACTCAAAACAAGCGACTTGGCTGAATCACCTTCTGTGATGATCAGA 12547 Query 169461 GTACA 169465 || || Sbjct 12548 GTGCA 12552 >seq16 Length=608225 Score = 107 bits (118), Expect = 2e-18 Identities = 242/364 (66%), Gaps = 15/364 (4%) Strand=Plus/Minus Query 169162 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 169221 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 527047 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 526988 Query 169222 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 169281 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 526987 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 526928 Query 169282 GACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAG 169341 |||| | || ||||| | |||| |||| || |||| | || ||| Sbjct 526927 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATGAGTTCAGCATTAGAAA 526868 Query 169342 CGTCGCGGACATTCTTACACTTCCCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAA 169401 | || || || ||| || ||||| | || || || ||||||| ||||| |||| Sbjct 526867 CATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACCAA 526808 Query 169402 CGACGGAGAGACCCGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGG 169461 | || || | ||| | |||| | || ||||||||||| || |||| || || | Sbjct 526807 CTACTGACATACCACTCAAGACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCAGAG 526748 Query 169462 TACA---------CTTTCCAGATTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGG 169512 |||| |||||||| | | ||| || |||||| || |||||||||| Sbjct 526747 TACAGCGCTTGTTCTTTCCAG---GAAC---ACCGGCAAAGTTTGCATCTTCCAACTTGG 526694 Query 169513 GAAT 169516 |||| Sbjct 526693 GAAT 526690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589970578582640