Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1 113 5e-20 >seq1 Length=2399970 Score = 113 bits (124), Expect = 5e-20 Identities = 487/755 (65%), Gaps = 29/755 (4%) Strand=Plus/Minus Query 159046 TATCATAGTGAGACTGACATGATGAGATATATCTATGAGTTAGCATCAAAAGATTTCTCA 159105 ||||| |||||| || ||| | |||| || || | | | | || ||| |||| Sbjct 544246 TATCACTCTGAGACCGAGATGCTTCGATACATTCATCACCTCGAAAGCAAGGATCTCTCC 544187 Query 159106 TTAGTAAATGGTATGGTTCCACTTGGTAGTTGTACTATGAAACTAAACGCAGCATCAGAA 159165 || || || ||| |||| || || || |||||||||||| | ||||| || | ||| Sbjct 544186 TTGGTCCATTCCATGATTCCTCTCGGCAGCTGTACTATGAAATTGAACGCCACAACCGAA 544127 Query 159166 CTGATGCCTGTGTCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACA 159224 |||| ||||| | ||| || ||| | ||| | || ||| ||||| | ||| || Sbjct 544126 ATGATTCCTGTCACCTGGCCCGAATTTTCCAACATTCACCCATTCGCACCTGTTGAT-CA 544068 Query 159225 GACCATGGGTTATCAAAAAATTATAGATGA-CTTACAGAAATGGTTATGTGATATCACAG 159283 ||| ||||||| || | ||||| ||| |||| | | | || ||||| | Sbjct 544067 GACACGCGGTTATCTCGCCATGCTGGATGAGCTTGCAGATGACTTGAAG-GAAATCACTG 544009 Query 159284 GGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGT 159343 | |||||| | | || | ||||| || |||| | || ||||| ||||| || || Sbjct 544008 GCTTTGATGGTGTCTCTCTTCAACCCAATTCAGGCGCTCAAGGTGAATATGCTGGTCTTC 543949 Query 159344 TAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATA---AAAGAAATGTATGTTTGA 159400 | |||| || ||||| || | || | | ||| | | | ||||| ||||||| Sbjct 543948 GTGTCATCCGTGCCTACCACCATGC-TC--GTGGTGAAAGCCACCGTAATGTGTGTTTGA 543892 Query 159401 TACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTG 159460 | || ||||| || || || || |||||||| |||| ||| || ||| | ||| Sbjct 543891 TCCCTATTTCAGCTCACGGCACCAACCCTGCATCTGCAGCCATGTGTGGTATGGACATTG 543832 Query 159461 TAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAA 159520 | | ||||||| | || ||| | ||||| | ||| | |||||||| Sbjct 543831 TGATCATTCAGTGTGACAGCAAGGGTAACTTGGACATGGAGGATTT------GAAAGCAA 543778 Query 159521 T--CATGAA--TACATTTGAACTGTCATGT---ATTATGATTACATATCCATCTACACAT 159573 || || |||| || | | || || ||||| |||||||| |||| | Sbjct 543777 AGGCAGAAAAGTACAAG-GACCGATTGGGTGCTATCATGATCACATATCCTAGTACATTT 543719 Query 159574 GGTGTATTTGAAACAAACATCAGACAGAT--ATGTAAGATTGTTCATGAGAATGGTGGTC 159631 ||| | |||||| || | | ||| ||| ||| | || || | | || |||| Sbjct 543718 GGTATGTTTGAAGCAGGTGTTT--CTGATGCATGCAAGGTCGTACACCAACACGGCGGTC 543661 Query 159632 AGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACT 159691 || |||||||| ||||| || | ||||| ||| | ||| || | || || || Sbjct 543660 TCGTTTATCTTGACGGTGCCAACTTGAATGCCCAGATCGGTTTAACCAAGCCTGCAGAGA 543601 Query 159692 ATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTG 159751 ||||| || || ||||| | ||||| || ||||| ||||||||||| ||||| |||| Sbjct 543600 TCGGTGCTGACGTCTGTCACATGAACTTGCACAAGACCTTCTGTATTCCTCATGGTGGTG 543541 Query 159752 GAGGTCCTGGCGTAGGTCCTATTG-GTGTAGCAAA 159785 | || || || | || ||||| | |||| |||| Sbjct 543540 GTGGACCAGGTATGGGCCCTATCGCATGTACCAAA 543506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588041012012960