Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq176 105 9e-18 seq13 102 1e-16 >seq176 Length=52331 Score = 105 bits (116), Expect = 9e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 104990 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATC 105049 |||||||| | |||||| | || ||||||||||||||||| ||| || |||| | Sbjct 28271 GAAGGTGACCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGCGCCAAATACGTT 28212 Query 105050 GACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109 ||||||||||| || ||||| || ||||| | || |||||| ||||| || || ||| Sbjct 28211 GACTGTGATACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTGATACT 28152 Query 105110 ATAAAAAATAACCCCGGGTGTCGAAGAATAATT 105142 |||||||| || ||| ||| ||||| ||| Sbjct 28151 ATAAAAAACAATCCCACTGATCGTAGAATCATT 28119 >seq13 Length=664605 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 104990 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATC 105049 ||||| ||| | |||||| | || ||||||||||||||||| ||| || |||| | Sbjct 416446 GAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGTT 416505 Query 105050 GACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACT 105109 || |||||| | || ||||| || ||||| || || |||||| ||||| || || ||| Sbjct 416506 GATTGTGATGCTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTGACACT 416565 Query 105110 ATAAAAAATAACCCCGGGTGTCGAAGAATAATTATA 105145 |||||||| || ||| ||| ||||| ||| || Sbjct 416566 ATAAAAAACAATCCCACTGATCGCAGAATCATTCTA 416601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658391793164560