Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq107 201 1e-46 >seq107 Length=77526 Score = 201 bits (222), Expect = 1e-46 Identities = 312/444 (70%), Gaps = 4/444 (1%) Strand=Plus/Plus Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 |||| || | ||| ||||| ||| ||| | |||||||| | || ||||||||||| Sbjct 40012 TAAATAAAAGACAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGC 40071 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 || || || || ||||| ||||| | ||| || | |||||| || | ||||| || | Sbjct 40072 TGAATGTCAAACCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAAC 40131 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 |||| ||||| |||||||| || || ||||| || |||||||| | | |||| ||| Sbjct 40132 CAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAG---AAC 40188 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | | |||||||| || | |||||| |||||| ||| | ||| || || | Sbjct 40189 CGTTAGAGGAAATCCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGT 40248 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||| || ||||| | | ||| |||| ||||| | |||||||| ||||| | | Sbjct 40249 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAA 40308 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 ||| || |||| | |||||| |||||||| || ||||| ||||| ||||| ||| Sbjct 40309 GACTGTAAGTTTCTGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 40368 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | | || || | | |||| | | | | |||||||||||||| || |||| Sbjct 40369 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 40428 Query 37585 CACTAGCTGCAAAGAAAG-CAAGA 37607 | | | |||||||| | ||||| Sbjct 40429 CTGAACCAGCAAAGAAGGCCAAGA 40452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592306538111440