Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq346 147 5e-30 seq22 138 3e-27 >seq346 Length=25747 Score = 147 bits (162), Expect = 5e-30 Identities = 285/415 (69%), Gaps = 18/415 (4%) Strand=Plus/Minus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| || ||||||||||| ||| || || || || || || | || ||| Sbjct 16174 TTGGTGAGCCTGGTGTTGGTAAGACAGCCATTGTCGAAGGCTTGGCTCGTCGTATCATCG 16115 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTT-TCTTTGAATATGGGTGCA 150520 | ||||||| || | ||| | | || ||| | || |||||| | |||||||| Sbjct 16114 AACGTGATGTGCCTCAATCTCTCCA----GTGCAAACTGTTCTCTTTGGACATGGGTGCC 16059 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580 || | ||||||| | ||||||||||||||||| ||||||||| | | | | || || Sbjct 16058 TTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTAAAA 15999 Query 150581 GAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTATG 150637 ||| | |||||| || || | | ||| |||| || ||||||||||| ||| || | Sbjct 15998 GAAGTCAAAGAATCTGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACACTGTTCTT 15939 Query 150638 GGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTA 150697 ||||| ||| | || | |||||| |||| |||| || | |||||| || Sbjct 15938 GGTGCCGGT---AAAGGTGAGGGTTCTATGGACGCTGCCAATCTGCTGAAACCTATGCTG 15882 Query 150698 TCTCGCGGTGAAATTCGTGTCATCGGTGCAACA--ACCTACGATGAATATCGTAAACACA 150755 |||| |||||| | || ||| || || ||| || ||| ||| |||||| || | Sbjct 15881 GCTCGTGGTGAATTGCGATGCATTGGCGCTACAACACTTAC--TGAGTATCGTGAA---A 15827 Query 150756 TTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 | ||||||||| | ||| | ||||||||||| ||||| ||| | | ||||| Sbjct 15826 TCGAAAAAGATCCTGCATTCGAGCGTCGTTTCCAAAAGGTCGATGTGGGAGAACC 15772 >seq22 Length=444912 Score = 138 bits (152), Expect = 3e-27 Identities = 283/415 (68%), Gaps = 18/415 (4%) Strand=Plus/Minus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| || ||||| ||||| ||| ||||| || || || || | || ||| Sbjct 79189 TTGGTGAGCCTGGTGTGGGTAAGACAGCCATCGTCGAAGGTTTGGCTCGTCGTATCATCG 79130 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTT-TCTTTGAATATGGGTGCA 150520 | |||| || || | ||| | || | ||| | || || ||| | |||||||| Sbjct 79129 AACGTGACGTGCCTCAGTCTCTCCAA----TGCAAACTGTTCTCATTGGACATGGGTGCT 79074 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580 || | ||||||| | ||||||||||||||||| ||||||||| | | | | | || Sbjct 79073 TTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTCTTGAAA 79014 Query 150581 GAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTATG 150637 ||| | || ||| || || | ||||| |||| || ||||||||||| ||| || | Sbjct 79013 GAAGTCAAGGAATCTGAAGAAGGTATTATTTTGTTTATTGATGAAATCCACACTGTTCTT 78954 Query 150638 GGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTA 150697 ||||| ||| | || | |||||| |||| |||| || | || ||| || Sbjct 78953 GGTGCCGGT---AAAGGTGAGGGTTCTATGGACGCTGCCAATCTGCTGAAGCCTATGCTG 78897 Query 150698 TCTCGCGGTGAAATTCGTGTCATCGGTGCAACAA--CCTACGATGAATATCGTAAACACA 150755 ||||||||||| | || ||| || || |||| | ||| |||||||||| || | Sbjct 78896 GCTCGCGGTGAATTGCGATGCATTGGCGCTACAACGCTTAC--TGAATATCGTGAA---A 78842 Query 150756 TTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 | ||||||||| | ||| | ||||||||||| ||||| ||| | | ||||| Sbjct 78841 TCGAAAAAGATCCTGCATTCGAGCGTCGTTTCCAAAAGGTCGATGTCGGAGAACC 78787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147570020946228