Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq17 176 8e-39 >seq17 Length=565816 Score = 176 bits (194), Expect = 8e-39 Identities = 860/1346 (64%), Gaps = 48/1346 (4%) Strand=Plus/Plus Query 212733 TCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCT 212792 ||||| |||||||| ||||| | || |||| ||||| ||||||||| ||| ||| Sbjct 454618 TCAGCAGCCATGTCAATGATGGTACGTTGAGAGATTTCCCAGACGGTCTTGTAGAGATCT 454677 Query 212793 TTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGC 212849 || | || | |||| || ||| | |||||| | ||| || | || ||| ||| Sbjct 454678 TTCAAGTTTTGAGGGATGCTGGGCACGTTCTGAATAGATCCTCCGTCAGCCATGATCATG 454737 Query 212850 TGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGG-CACT---TGACCAGGTG 212905 | | || || || |||||||| ||| | |||| ||| | |||| Sbjct 454738 TTCTT---CACATCGTCATTCCAGAGACCCATATCGACCAGATCACGGAGTAACCA---- 454790 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 ||| ||||| || ||| | |||||||||||||| | | |||||||| || ||||| Sbjct 454791 AGGATTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTATAAAAGTTGGATGTGTA 454850 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 || || | | ||| ||| || || || || | |||| || || ||||| ||||| Sbjct 454851 AGGTTCAAAACACTCATTGAAACCGAGCATTTGAGAAGTGGAAGCAGTAGGCATAGGAGC 454910 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 ||||| ||| ||| | || || |||| | | || | || | |||||||| Sbjct 454911 AACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGTGCGGCCCAGTC 454970 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| ||| ||| || || ||||||||||| | |||| ||| || || Sbjct 454971 CCAG-----AGATTGGTAGGTGTG----ACATTCCACATGTCGTATTGCAGGATACCCTT 455021 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 | || || ||||| | || | |||||| |||| || | |||| ||||||||| Sbjct 455022 GGATACAGGACTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAGGA 455081 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 || | || |||||| | ||||||||||||||| || | |||| |||| |||||| || Sbjct 455082 GGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAGCTGCTTGGCTTC 455141 Query 213266 TGGGGACGTGAAGGGCATCATCATGCG-TTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || || ||| || || | | | ||| || || | || || || || | Sbjct 455142 AGGTGAATCGAATGG-ATAGCGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACACCTA 455200 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || || ||||| |||||| ||| || ||| || || | ||||| | ||| Sbjct 455201 AACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGC-TTCGATGACAGGGTAGTAATTG 455259 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 |||||||||||||| | ||| | ||| || ||||| |||| | ||| | | | Sbjct 455260 ATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGG 455319 Query 213444 TGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTG 213503 || | || | | | | | |||| | |||||| || ||| ||||| ||| Sbjct 455320 AAAT--CATACTTTTCTCTATTAAT-CACATAGGTAGGCAGAGCAATGGAGGCCAAGTTA 455376 Query 213504 CAAACGGCCACCTCCTGA-GAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 || || || || || | | || || | ||| || | || || || |||||||||||||| Sbjct 455377 CAGACAGCGACTTCGTCAGGACTC-GAGTATTCAACAATTTCTGTACACAGGTTGCTGCA 455435 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 | ||| || |||| ||| || || || |||| ||| || |||||| ||||| || Sbjct 455436 TTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTAT 455495 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAGGTACCTGGCC 213680 | | || || ||||| || | | ||| | |||| ||| || | ||| Sbjct 455496 GAACGGATTACCTGTCTCCGTTTGAGCCTCCA--AAATGGCATACCACAGCTTTTGAGCC 455553 Query 213681 TTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 |||| || ||||| | ||||| | ||| ||||| | || Sbjct 455554 TTGATTGTTTCTCT---AGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAAC 455610 Query 213741 TCGTGGCCCCAGA--CCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCAG 213797 || | ||||| | | ||| | ||| ||| | || |||||| | || ||| Sbjct 455611 TCATCACCCCAAATTTCATGT--AATCCAGGAGCCTCAT-TGGGACAAAACAGAGACCAA 455667 Query 213798 TCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857 || || | |||||||| | ||||||||| || || || | ||| || || |||||| Sbjct 455668 TCACCACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGCATAGAACAGA 455727 Query 213858 TCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATG 213917 || | | || | ||||| ||| ||||||| |||| ||||| |||| || ||| Sbjct 455728 TCGCGAGCTCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAGGTGAAAATG 455787 Query 213918 TCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCC---TCTTGCCGCCCTGG 213974 || || ||||| || |||| ||| || || || |||||||| | | || ||||| || Sbjct 455788 TCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGTTTATTACCGCCTTGA 455847 Query 213975 TCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGT 214034 || || | ||| ||||||| | || || | ||| | | |||||||| | Sbjct 455848 TCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAATCCGTTGGAGTAA 455907 Query 214035 CCGTTGGTTCCCGCTATATACGAGCC 214060 |||||||| || || ||||| || || Sbjct 455908 CCGTTGGTGCCGGCAATATATGATCC 455933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931516661194240