Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq17 118 2e-21 seq47 114 2e-20 >seq17 Length=565816 Score = 118 bits (130), Expect = 2e-21 Identities = 732/1158 (63%), Gaps = 44/1158 (4%) Strand=Plus/Plus Query 221351 TTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAA 221410 || || || ||||| || || || | |||||||| || ||| ||| ||| |||| Sbjct 455020 TTGGATACAGGACTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGCAG 455079 Query 221411 GACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGC 221469 || || || | |||||| ||||||||||| |||||||| |||| || |||||| Sbjct 455080 GAG-GCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAGCTGCTTGGC 455138 Query 221470 CTCGGGAGAAGTGAAGGGCATA-CGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACT 221527 || || ||| ||| || ||| || || | |||||| |||||| | || || || Sbjct 455139 TTCAGGTGAATCGAATGG-ATAGCGAAGAGCCATGAAAGT-GTCGGCTAAGCCTTGAACA 455196 Query 221528 CCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAG 221587 || | ||| || || || |||||| ||||||| | ||||| || || || | Sbjct 455197 CCTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGGTAGTAA 455256 Query 221588 TTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTC 221647 |||| ||||| | ||||| | ||| |||||| || || || ||| ||| || Sbjct 455257 TTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTT 455316 Query 221648 TGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCA 221707 ||| || | ||| | | | |||| | | || ||| Sbjct 455317 TGGAAAT------CATACTTTTCTCTATTAAT---------CACATAGGTAGGCAGAGCA 455361 Query 221708 ACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTA 221767 | | ||||| |||||| || || || ||||| | | || | | || |||||| Sbjct 455362 ATGGAGGCCAAGTTACAGACAGCGACTTCGTCAGGACTCGAGTATTCAACAATTTCTGTA 455421 Query 221768 CAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG 221827 || ||||||||||| ||||| || |||| || | |||||| ||| | || ||| Sbjct 455422 CACAGGTTGCTGCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCA 455481 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 ||||| ||||| || || ||| || |||||| |||||| ||| ||| | ||| Sbjct 455482 TCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGCCTCCAAAATGGCATACCAC 455541 Query 221888 AGTTCTCTGGCGCTCACCGTC-CTCTTGA-----CTGCACCCTCGGTCTTTTCATACCCG 221941 || | | || | | || |||| | || ||| ||| |||||||| Sbjct 455542 AGCTTTTGAGCCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAG--- 455598 Query 221942 GTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGA 222001 |||||| |||||| ||||| | || | | || ||| | |||| Sbjct 455599 ----AGAGCAA--CAAACTCATCACCCCAAATTTCATGTAATCCAGGAGCCTCATTGGGA 455652 Query 222002 CACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCAC 222061 || | |||| ||| | |||| |||| | |||||||||||| || || ||||| Sbjct 455653 CAAAACAGAGACCAATCACCACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAG 455712 Query 222062 AGCGCCTGAAAGAGATCTC-TGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120 || || | || ||||| | | || | | || || ||| |||||| | || ||| Sbjct 455713 AGAGCATAGAACAGATCGCGAGCTCTGAT-TTCGTCTTTGCCAAAGTTTTTTCGCAAATC 455771 Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180 ||||| |||||||| || ||||| || |||| || | || | ||||| || || Sbjct 455772 TAAAAAGGTGAAAATGTCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACG 455831 Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTAC 222240 || || || || ||||| || | || | |||||| | || || | || | Sbjct 455832 TTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAG 455891 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300 | ||||||||| |||||||||||| ||| || | || | || | | ||| | Sbjct 455892 TAATCCGTTGGAGTAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTT-GT 455950 Query 222301 GGCAG-ACATGCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 | | || ||| || || || || ||| || ||||| || ||| | ||||| || Sbjct 455951 GAATGTTCAAGCCAATGCCGCCTGC-TGTCTTGGAGATTTGAGCACAGATTTTGAGCGTC 456009 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT-G 222417 || ||| || || || || || ||||| | | | |||| || ||||| ||||| | | Sbjct 456010 TCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGG 456069 Query 222418 AGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGA 222477 || ||| | | || ||||| || || ||||| |||||||| ||||| | || Sbjct 456070 GGACGAGGT-GTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTGAAGTATCTTTCGGA 456128 Query 222478 CATCAGATCGTACGTCTC 222495 ||||| | ||| ||||| Sbjct 456129 CATCAAGTTGTATGTCTC 456146 >seq47 Length=189370 Score = 114 bits (126), Expect = 2e-20 Identities = 686/1088 (63%), Gaps = 40/1088 (4%) Strand=Plus/Plus Query 221419 CAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGA 221478 || |||||||||||||||||| |||||||| |||| | |||||| || || || Sbjct 152341 CAAGGCAGCGTGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTCAGGTGA 152400 Query 221479 AGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGA 221537 ||| || ||| || | |||||| ||||||| | || || || || | ||| | Sbjct 152401 GTCGAATGGATAACGAAGAGCCATGAAAG-CGTCGGCTAAGCCTTGAACACCTAAACCAA 152459 Query 221538 TGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 | || ||||||||| ||||||| | ||||| || || || | |||| |||| Sbjct 152460 TCGGTCTGTGTCTCTTGTTGGATCTTTCGGCTTCGATGACAGGGTAGTAATTGATATCGA 152519 Query 221598 TCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGA 221657 | | ||||| | ||| |||||| || || || ||| ||| || ||| || Sbjct 152520 TGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGGAAAT--- 152576 Query 221658 ACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCA 221717 | ||| | | | | |||| | | || |||| | ||||| Sbjct 152577 ---CATACTTTTCTCTATTGAT---------CACATAGGTAGGCAGAGCAATGGAGGCCA 152624 Query 221718 GGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGC 221777 |||||| || || || || || | | || | | || |||||||| || |||| Sbjct 152625 AGTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGC 152684 Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837 |||||||||| || |||| || | |||||| ||| | || ||| ||||| |||| Sbjct 152685 TGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGA 152744 Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897 | || || ||| || |||||| ||||| ||| ||| | ||| || | | | Sbjct 152745 GTATGAACGGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCATAGCTTTTGAG 152804 Query 221898 CGCTCACCGTC-CTCTTGA-----CTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCA 221951 | | | || |||| | || ||| ||| |||||||| |||||| Sbjct 152805 CCTTGATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAG-------AGAGCA 152857 Query 221952 TGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGAC 222011 |||||| ||||| | || | | || ||| |||||| | |||| Sbjct 152858 A--CAAACTCGTCACCCCAGATTTCATGTAATCCAGGAGCTTCATTGGGACAAAACAGAG 152915 Query 222012 TCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAA 222071 ||| | |||| |||| | ||||||||| || || || ||||| || || | | Sbjct 152916 ACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGA 152975 Query 222072 AGAGATCTCTGG-TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 | ||||| | | || | | || || ||| |||||| | | || ||||| Sbjct 152976 ACAGATCACGAGCTCTGATT-TCGTCTTTGCCAAAGTTTTTTCGTAAGTCTAAAAAGGTG 153034 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 ||||| || || ||||| || |||| || | || | ||||| || ||||| || || Sbjct 153035 AAAATATCTGCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTACCG 153094 Query 222191 CCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTG 222250 || ||||| || | || | |||||| | || || | || | ||||||||| Sbjct 153095 CCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAGTCCGTTG 153154 Query 222251 GATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGA-CAT 222309 || ||||||||| || |||||| | || | || | | ||| || | || Sbjct 153155 GAGTAACCGTTGGTACCGGCAATGTATGATCCACTAGCACGAATGTTG-TGAATGTTCAA 153213 Query 222310 GCCGATACCACCGGCGTGT-TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368 ||| |||||||| || ||| || ||||| || ||| | ||||| || || ||| | Sbjct 153214 GCCAATACCACCTGC-TGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 153272 Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAG-ATTTGGTG 222427 | || || || || ||||| | | | |||| || ||||| |||||||| | | |||| Sbjct 153273 CTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTG 153332 Query 222428 GAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCG 222487 | | | ||||| || || ||||| |||||||||||||| | |||||||| | | Sbjct 153333 TGCCTG-CATTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTG 153391 Query 222488 TACGTCTC 222495 || ||||| Sbjct 153392 TATGTCTC 153399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928828707763840