Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq17 102 4e-17 >seq17 Length=565816 Score = 102 bits (112), Expect = 4e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24683 ACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAA 24742 ||||| ||| ||| ||| | ||| ||||| ||||| || ||| ||||||||| | ||| Sbjct 415996 ACTGCAGGTCTAGATCTTAAATAGTACATGCCAGTCTTTAATCCCTTCTTCCAGGCATAA 415937 Query 24743 AAATGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGA 24802 || ||||| || || ||||| ||| ||||| | | |||||| ||||| |||||| Sbjct 415936 AAGTGCATAGAGGTCAGTTTGCCAAAGTTTGGTTCGGCAGTAAACAAATTCATAGATTGA 415877 Query 24803 GCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATA 24862 | |||| | |||| | |||||| || || | |||||| || ||| | || || Sbjct 415876 GATTGGTCGATAAAAGCTCCTCTATCAGCGGCCATGTCAATAATAGTTCTTTGTGAAATC 415817 Query 24863 TCGTAAGCTGTTTTGTATCTCTCTTT 24888 || | ||||||||||| || ||| Sbjct 415816 TCCCATACTGTTTTGTATAGCTTTTT 415791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253035725679950