Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 >seq4 Length=1094480 Score = 260 bits (288), Expect = 2e-64 Identities = 521/761 (68%), Gaps = 21/761 (3%) Strand=Plus/Minus Query 47553 AACCAATTGTTTAAAAGAAGTTTTAGGTTCCCAACCCAATTTTTTCTTTGCCTTAGAGGC 47612 |||||||| | ||||| | || | | ||| || |||| | | |||||||| | | Sbjct 433531 AACCAATTCGTCAAAAGTAACCTTGCGCTTCCAGCCTAATTCTGTGTTTGCCTTTGTAGG 433472 Query 47613 ATCACCTAATAAGGTCTCTACTTCAGCAGGACGGAAATATTTAGAGTCAATTCTGATA-- 47670 |||||| |||||| || ||||||||||||||||| || || | |||||| | | | Sbjct 433471 ATCACCCAATAAGAGATCAACTTCAGCAGGACGGAAGTACTTGGGGTCAATGCGCACACG 433412 Query 47671 -ACCGTTTTACCA---TCAGAATCAATACCAACTTCATCAAGACCAGAACCTTCCCATCT 47726 ||| || || |||| || |||||||||| | | ||| ||||||||| Sbjct 433411 GACC---TTGCCTGTTTCAGCGTCTTTACCAACTTCGTTCACACCTTCACCTTCCCAAAC 433355 Query 47727 AATATTCATATCAAAATAAGGTGCA-GATTCCTCAACAAACTGACGGACAGAATATTGAT 47785 |||| | | || | | || | | | || ||||| | ||| | | | | Sbjct 433354 AATAGT-ACGTCCAGTCACCTTGAAAGCCTTTTCGACAAAGCTTCTGACTGTGTGTGTTT 433296 Query 47786 TTCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCT 47845 || || || | || ||||| | ||| | ||||| || ||||| | ||||||| | | Sbjct 433295 CACCAGTAGCCAAGACGAAATCTTGAGGCTGATCTTGCTGCAGCATGAGCCACATACCTT 433236 Query 47846 CGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAAC 47905 |||||||||| | ||||||||||| ||||| ||||||| ||| || ||||| | | Sbjct 433235 CGACATAATCACGAGCATGTCCCCAATCACGCTTAGCATCAATATTACCGAGATAAAGGC 433176 Query 47906 AGTCTTG-CTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 | ||||| | | || | ||| || | || | |||||||| || || || || Sbjct 433175 ACTCTTGACGTCCCAAGTG-GATGTCTGCGACAGCACGAGTAATCTTTCGGGTAACGAAG 433117 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 || ||||| | || |||||||| || || ||||||||| |||||||| |||| | Sbjct 433116 GTACGGCCACGACGAGGTGATTCATGGTTGAAGAGAATACCATTACAGGCAAACATATTG 433057 Query 48025 TATGATTCACGATAGTT--CTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAG 48082 ||||||||||| ||||| | || ||||| || ||||| || || || |||||||||| Sbjct 433056 TATGATTCACGGTAGTTGACCGTA--ATCCAATAACCATAAAGCTTGGCTACACCATAAG 432999 Query 48083 GAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAA 48142 | ||||| |||||||| ||||| || || | || || || || || |||||||| | Sbjct 432998 GGGAACGGGGATAGAAGGGTGTTGTTTCCTTTTGGGGTGTTTCAACTACTTTACCATAGA 432939 Query 48143 GTTCACTGGTGGATGCTTGATAGATACGAACCCTATC--TTCCATCTCAAGCAAACGGAC 48200 ||||| ||| || |||||||||| |||||| | ||| || | | |||| ||||| Sbjct 432938 GTTCAGAGGTAGAAGCTTGATAGAAACGAACACGATCGGTTAAACCACAAG--TACGGAT 432881 Query 48201 TGCCTCAAGCACTCTCAGGGTGCCTATGGCATCTGTCTGACCAGTATACTCGGGCATCTC 48260 || ||||| | | || ||||| | || || | ||| ||||| || | ||| || Sbjct 432880 AGCATCAAGTAAACGAAGTGTGCCAAGAGCGTCGACGTCACCGGTATATTCTGACATGTC 432821 Query 48261 AAACGAAACCTTTACATGACTCTGTGCCCCAAGATTATAAA 48301 ||| || ||||| |||||| || || ||||||| |||| Sbjct 432820 AAAAGAGACCTTGACATGAGATTGAGCTGCAAGATTGTAAA 432780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665482870309520