Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1 122 2e-22 seq4 118 2e-21 >seq1 Length=2399970 Score = 122 bits (134), Expect = 2e-22 Identities = 180/254 (71%), Gaps = 2/254 (1%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || |||| || | |||| ||||| || || Sbjct 341882 ATTTGCATACCACCACGGAGACGGAGGACCAAGTGAAGAGTAGATTCTTTTTGGATGTTG 341823 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || | ||| || | |||||| || ||||| || | ||||||||| Sbjct 341822 TAGTCAGAGAGAGTACGGCCATCCTCGAGTTGTTTACCAGCAAAGATAAGTCTCTGTTGG 341763 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| |||||||| || || || | |||| ||| |||| ||| Sbjct 341762 TCAGGAGGGATACCTTCCTTATCTTGAATCTTTTGCTTGACATTTTCGATACTATCAGAA 341703 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTA 193364 || || ||||||| ||| || || || || || || || ||||| || ||||||||||| Sbjct 341702 GATTCGACTTCTAAAGTAATTGTCTTGCCGGTAAGAGTCTTTACGAAGATTTGCATTTTT 341643 Query 193365 TTAGTA--AAATAA 193376 | | || |||||| Sbjct 341642 TAAATAAGAAATAA 341629 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| ||||| || | |||| ||||| ||| ||||| || || || | | Sbjct 342559 CGAAGAACCAGGTGAAGAGTAGATTCTTTTTGAATGTTATAATCACTCAAAGTACGACCG 342500 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | |||||| || || ||||| | | ||||| |||||||| || ||||| ||| Sbjct 342499 TCTTCGAGTTGTTTACCAGCGAAAATGAGACGTTGTTGGTCAGGAGGGATACCTTCCTTA 342440 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || || | |||| |||| ||||||||||||||||||| | || || Sbjct 342439 TCTTGAATCTTTTGCTTGACATTTTCAATACTATCGGAAGACTCAACTTCCAAGGTGATG 342380 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || ||||| || || || || ||||| |||||||| Sbjct 342379 GTCTTACCAGTAAGAGTCTTGACAAAGATTTGCAT 342345 >seq4 Length=1094480 Score = 118 bits (130), Expect = 2e-21 Identities = 181/256 (71%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | ||||| |||| || | |||| || || || ||| Sbjct 349668 ATTTGCATACCACCACGGAGACGAAGGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTA 349609 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| || || | ||| || | |||||| || ||||| || | | |||||| Sbjct 349608 TAGTCGCTTAGAGTACGGCCATCTTCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGA 349549 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || ||||| || ||||| || || ||||| ||| ||||| || ||| Sbjct 349548 TCAGGAGGAATACCTTCCTTGTCTTGAATCTTTTGTTTTACATTGTCGATAGTGTCAGAA 349489 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT--TT 193362 || |||||||||| ||| || || || || || || || || ||||| |||||||| | Sbjct 349488 GATTCAACTTCTAAAGTAATTGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGATG 349429 Query 193363 TA-TTAGTAAAATAAT 193377 || ||| |||||||| Sbjct 349428 TATTTATAAAAATAAT 349413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899638813487520