Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq47 147 6e-30 seq32 145 2e-29 seq17 125 2e-23 seq12 118 3e-21 seq9 95.1 4e-14 seq279 86.0 2e-11 seq13 86.0 2e-11 >seq47 Length=189370 Score = 147 bits (162), Expect = 6e-30 Identities = 580/900 (64%), Gaps = 17/900 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 |||||| ||||| || ||||| || | |||||| || || || || | ||| || Sbjct 152656 GTATTCAACAATTTCTGTACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATT 152715 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 | || ||||||||||||||||| || || ||| | || | ||||||||| | || || Sbjct 152716 ACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAACGGATTACCTGTCTCCGTTTGAGC 152775 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCG 155808 |||| ||| ||| || | | || || ||| | || | | ||| ||||| Sbjct 152776 TTCCAAAATGGCATACCATAGCTTTTGAGCCTTGATT-GTTTCTCTAGCTCTTCCTTCAC 152834 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 || ||||| ||| || | | || ||||| | ||| | |||||| Sbjct 152835 GTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACCCCAGATTTCATGTAATCCAGGAG 152894 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATT---ACACGCTCCATAAATA 155925 | || ||| |||||||| |||||| | | |||| | ||||||| ||| || | Sbjct 152895 CTTCATTGGGACAAAACAGAGACCAA---TCACCACCGTCTCTGACACGCTGCATGAAAA 152951 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCC-TCATCGCCGTGA 155984 |||| ||| | ||||||||| || || | || | ||| | | || | ||| Sbjct 152952 GATCAGGAATCCAGAGAGCATAGAACAGATCACGAGC-TCTGATTTCGTCTTTGCCAAAG 153010 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 || || |||| ||||| || |||||| | ||| || |||| ||||| || Sbjct 153011 TTTTTTCGTAAGTCTAAAAAGGTGAAAATATCTGCATGCCAGGGTTCCAAGTACATTGCG 153070 Query 156045 AAACTACC---ATTCCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || || | | | || || || ||||| ||||| ||||| || || ||||| ||| Sbjct 153071 AATGCGCCCGGACGCTTATTACCGCCTTGATCGACATAACGAGCCGTATTGTTGAAAACA 153130 Query 156102 CCTAGCATAGG-AATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGA 156160 | ||||| || |||| | || ||||| || ||||| ||| ||| | || ||| Sbjct 153131 CGGAGCATGGGCAATAGT-CCGTTGGAGTAACCGTTGGTACCGGCAATGTATGATCCACT 153189 Query 156161 TGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCA 156220 | |||| || ||||| | | ||||||||||||| || || |||||||| || Sbjct 153190 AGCACGAATGTTGTGAATGTTCAAGCCAATACCACCTGCTGTCTTGGAGATTTGAGCACA 153249 Query 156221 TTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCA 156280 || | || | | |||||||| || ||||| || | ||| | || | |||| Sbjct 153250 GATTTTGAGCGTCTCATAGATACCTTCGATCGAATCTTCCTTCATGGTGAGCAAGAAGCA 153309 Query 156281 CGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 ||| | || || || ||||| || || || ||||| ||||| | || || |||| Sbjct 153310 AGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAA 153369 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAA 156399 || | | |||||| | | ||||||||| | | || | |||| || | || || | Sbjct 153370 GTATCTTTCAGACATCAAGTTGTATGTCTCAAT-AGCTGCATCAATATCGGTTCCATGGA 153428 Query 156400 TACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTC 156459 ||| ||| | || | ||| || ||| |||||||| || ||||| || ||||| Sbjct 153429 TACCGATCGCAACACGCATAATCAAATGTTGAGGACGTTCAGCAATCTTGCCGTCAATCT 153488 Query 156460 GCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGT 156519 || ||||| | ||||| || ||||| || || || | | || |||||||||| Sbjct 153489 TGAGGAGGTAAGAACGTTCGAGGGTTTTGAAACCAAAGAAGTTGTACTTGAAATCACGGT 153548 >seq32 Length=255307 Score = 145 bits (160), Expect = 2e-29 Identities = 209/291 (72%), Gaps = 8/291 (3%) Strand=Plus/Minus Query 302590 AAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACA 302649 |||||||||||||||||||| ||| | ||||| |||||||||||||| ||||| || Sbjct 29154 AAACGACGCTGAATATAACCTGTTTCTGCAGTTTTGACAGCTGTATCAATAAGACCTTCA 29095 Query 302650 CGACCACCCATAGCATGGAAGAATAGCTC--TTCCGGTCGTAGCCCCCCAATAAAGGAGC 302707 ||||||||||||||||||||||| | ||| | |||| | || | | | | ||| Sbjct 29094 CGACCACCCATAGCATGGAAGAAGAACTCGGTAGGGGTC--AAACCTCTGAGATAAGAGT 29037 Query 302708 TCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCC 302767 | || ||||||||||| ||||| | || ||||| ||||| || || || | Sbjct 29036 TTTCGACGAAACCACGACTTTCGGGACTGTGATCATCCTTGGAGAAGTGAGGAAGAGTAC 28977 Query 302768 TGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAA 302827 | || ||||||| || |||||||| || |||||||| || || || | || | | Sbjct 28976 GGAACTTGAAGCCGTAAGGAATACGCTTGCCTTCAACGTTTTGTTGACCGACACAAGCAG 28917 Query 302828 TCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAGCATTTACCAT 302876 ||| || ||||| || ||| | | ||||| || |||||| ||||||| Sbjct 28916 ACATTTGAGAAATGTT--AATGAAGGAACCCTTAGAACCAGCAATTACCAT 28868 Score = 107 bits (118), Expect = 6e-18 Identities = 115/148 (78%), Gaps = 7/148 (5%) Strand=Plus/Minus Query 301815 AATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAG-ACTTGGACGCAACACCAGCA 301872 |||||| ||||| ||| || |||||| | |||||||| ||||| ||||||||| Sbjct 29947 AATTTCCTTCAA-ACGAGGTACACCAAGTGTTACGTTTTTACTTGAT----ACACCAGCA 29893 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||||||||||| || | ||||| | |||||||||||| ||| || ||||| Sbjct 29892 TAGTGGAAAGTATTCAGTGTCATCTGAGTGGCAGGCTCACCAATAGATTGAGCAGCAATA 29833 Query 301933 ATACCAACCATTTCTCCTGGTGCTACAA 301960 ||||||||||||| || || || |||| Sbjct 29832 GTACCAACCATTTCACCAGGAGCAACAA 29805 >seq17 Length=565816 Score = 125 bits (138), Expect = 2e-23 Identities = 314/466 (67%), Gaps = 17/466 (4%) Strand=Plus/Minus Query 155912 ACGCTCCATAAATACATCACTCGCCCA-AATAGCATAGAAAAGGTCCCTTGC---CTTTG 155967 ||||||||| || | |||| | |||| ||| || |||| | ||| | ||| | || Sbjct 414572 ACGCTCCATGAAAAGATCAGGCACCCATAATCCCA-AGAACAAGTCGCGTGCGCGCATT- 414515 Query 155968 ACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATA--TCAGGATGGTG 156025 |||||| | || | ||||| || | || |||||||| |||| || ||| Sbjct 414514 --TCCTCAGCACCATTGTTCTTGCGCAAGTCCAAGAATTCG--AATACGTCGACATGCCA 414459 Query 156026 TGGCTCCAGATACATAGCAAAACTACCATTCCTCTTGCCACC--CTGATCT-ACATACCG 156082 || || | ||| | |||||| |||| || | || ||||| || | | ||| | || Sbjct 414458 AGGTTCTATATAGACAGCAAAGTTACCGTTGCGTTTACCACCTCCTTGTGTCACAAAGCG 414399 Query 156083 AGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC 156142 |||||| | ||| ||||| | ||||| |||||||| |||||||| ||||| || ||||| Sbjct 414398 AGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTGCCGTTTGTTCC 414339 Query 156143 -GCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACC 156201 |||| ||| || ||||| |||| || ||| | | |||| ||| || | Sbjct 414338 TGCGA-TATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAGCAG 414280 Query 156202 ATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTT 156261 | || || || |||| || | | ||||| | | || ||||| ||| || |||| Sbjct 414279 ACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCTCTT 414220 Query 156262 CCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTG 156321 |||| | || |||| | ||||||||| ||||| ||||||||||| | || Sbjct 414219 TCATTTGAACAAGGAAGCAACTAGACAATTGAGGTTTAGGTGTACCAGCGTTGAACAATG 414160 Query 156322 TAGGTGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGT 156367 ||||||| |||||| |||| || ||| |||||| ||| || || Sbjct 414159 TAGGTGTAGCATGAGTAAAGTATTTAGATGACATAAGATCATAGGT 414114 >seq12 Length=672027 Score = 118 bits (130), Expect = 3e-21 Identities = 212/306 (69%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 || || |||||||| ||| |||||||||||| | || ||||| ||||||||| |||| Sbjct 610705 GCCATCAGACCACAGATATCACACACATGGACACGATATGCATCTGATGCGTCAAATAGA 610646 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 || |||| ||| ||| |||| || |||||||||||||| | ||||||||||| Sbjct 610645 CGTTCCTTCAAGAATTGAGCAACACCATGGGAAATCATACAATCTCTTTCCATTTCACCA 610586 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA 251583 ||||| | ||||||||| | | | ||| ||| | ||||| | || | | | | Sbjct 610585 AAACGTAAACCACCATCTCTTGAACGACCTTCGACTGGCTGTCTTGTCAAGATCTGTACA 610526 Query 251584 GGACCGATGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAAT 251643 || || | | || || || |||||| | |||||| || || | |||||| || | Sbjct 610525 GGTCCTCTTGCTCGACTGTGGATCTTATCGTCTACCATGTGTTTCAAACGCTGATAATAG 610466 Query 251644 GCGGGACCGATGAAGATGCTCGAAGGCATT-TGCT---CTCCAGTTAGAGCGTTATACAT 251699 | ||||| | || || || | |||||| ||| ||||| | | | |||||||| Sbjct 610465 GTTGGACCCAAGA--ATACTTG--GGCATTCAGCTTACGACCAGTAAAACCATTATACAT 610410 Query 251700 AACTTC 251705 ||||| Sbjct 610409 GACTTC 610404 Score = 100 bits (110), Expect = 8e-16 Identities = 228/338 (67%), Gaps = 4/338 (1%) Strand=Plus/Minus Query 252348 GAATAGACCACGGTCAATAGAACCCTTGTTAAATAGGACACTATCCTCCTGATTATAACC 252407 ||| |||||||| || ||| || || || | | |||| ||| || ||||||||||| Sbjct 609749 GAAGAGACCACGATCGATACTACTCTGATTCATGATGACAGAATCTTCTTGATTATAACC 609690 Query 252408 AGAATGACTCATAATGGCTACAATAACTTGCTCGCCAGATGGAATGGTAT-TGAGTTTGA 252466 ||| | || | ||||||||||||| | | | |||| |||| | | | ||| | | Sbjct 609689 AGAGTAACATAAAATGGCTACAATAGCATTTTGACCAGCAGGAA-GTTCTCTGAATCGCA 609631 Query 252467 TAATATCCATAAGACGAGTATCAACAAGCGGTCTCATCGGGTAAGATAGAACATATGCTG 252526 || ||||| || ||| || || | || ||| | |||| || || Sbjct 609630 AAAACTCCATGGATCGTGTAGTTGTCAGTGGCTTTTGAGGATAATACAGAATATTGGCAA 609571 Query 252527 TCTTATCCATCCTATTATCATAATTTGTAACATACATACCAAGCGCCTGCTTTCCCATAG 252586 | ||||||| | | | |||| |||| ||| | ||| | |||||||| ||||||| Sbjct 609570 GCGTATCCATACGCATTTGGAAATTAGTAAGATAAACACCCATGGCCTGCTTACCCATAG 609511 Query 252587 CACTCTGGTAAGTATTTCTGGGAGACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTA 252646 || || || || || | |||||||| |||| || |||||||||||| || || | Sbjct 609510 CAGATTGATAGGTGTTACGAGGAGACTGGTTGTGATCAGGGAAAGGAATG-ATACTGGCA 609452 Query 252647 CA-ACACCGAAGATAGTGCTTGGGTGAATTTCACAGTG 252683 || | ||| | ||| | ||||| |||||||||||||| Sbjct 609451 CAGATACCAAGGATCATACTTGGATGAATTTCACAGTG 609414 >seq9 Length=817392 Score = 95.1 bits (104), Expect = 4e-14 Identities = 214/320 (67%), Gaps = 4/320 (1%) Strand=Plus/Minus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||| | |||||||||||| || | ||||| | || || | ||| | | || | Sbjct 59128 TTTACCGATAGCATCAATTTCATCTACAAAAATGATGCATGGTGCATTCTTCTTGGCTGT 59069 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 |||||| || ||||||||||| || | |||| ||||||| ||||||| ||||| || || Sbjct 59068 TGCAAACAAGTCTCTTACACGAGACGAACCAACACCAACAAACATTTCAACAAACTCTGA 59009 Query 289146 AGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGT 289205 | | || || | ||| | ||| ||||| || ||| || | || || | ||| Sbjct 59008 ACCAGAGACACTCAAGAAGGGCACACCAGCTTCACCGGCTGTGGCTTTTGCGAGCAATGT 58949 Query 289206 CTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGA 289265 |||||||| || || || || || | | || || || | |||| ||| ||| Sbjct 58948 TTTACCTGTACCTGGGGGACCTGACAAAATGGCACCTTTAGGAATGGTTGCACCA--AGA 58891 Query 289266 C--TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 | | ||| |||| ||||||| |||| |||| ||| || ||| | || || Sbjct 58890 CGTTCATAAGCAGCAGGATTCTTTAAGAATTTGACAAACTCCATAATTTCTTCCTTGGCT 58831 Query 289324 TCATCACATCCTGCTACATC 289343 ||||| ||| || ||||| Sbjct 58830 TCATCTGCTCCAGCAACATC 58811 >seq279 Length=32696 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/170 (71%), Gaps = 9/170 (5%) Strand=Plus/Minus Query 354604 TCAATATGATGAAATGCGTGCTGTGCGACATAAGCGAGACGCATATTAGGATGTTTCACG 354663 || || ||||| || ||||| || |||||||| || | ||||| ||||||||| || | Sbjct 31771 TCGATGTGATGGAAAGCGTGTTGAGCGACATAGGCAATACGCAAGTTAGGATGTCTCCAG 31712 Query 354664 ACCTTTGCGGCTCCCTCTTCGTTGGGTTCAATTTCACCAACCATCAACTTAATCATTGTA 354723 || | | | |||| || |||||||||||| || |||||| |||| ||| Sbjct 31711 ACAGT---GCCAACCTC------GGACTCAATTTCACCAGTCAACAACTTGATCAAGGTA 31661 Query 354724 GACTTTCCAGCACCATTAACACCTATTACTGCGATACGGGACGCCATAGA 354773 ||||| ||||||||||| ||| || || || | ||| || || | ||| Sbjct 31660 GACTTACCAGCACCATTGGGACCAATGACGGCAACACGAGAGGCAAGAGA 31611 >seq13 Length=664605 Score = 86.0 bits (94), Expect = 2e-11 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 289025 TTTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAA 289084 ||||||||| ||||||||||| || | || || | ||| |||| |||| | || Sbjct 622499 TTTTACCAATTGCATCAATTTCATCCACAAAGATGATACAAGGAGCGTTTTTCTTGGCTG 622558 Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 |||||||||| || | || ||||| | || | || ||| |||| || ||||| |||| Sbjct 622559 TTGCAAATAAATCACGGACTCGGGAAGAGCCCACGCCGACAAACATCTCAACAAACTCAG 622618 Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || || | || | ||| |||||| ||||| |||| | || | ||| | Sbjct 622619 AGCCAGACACGCTATAAAAGGGAACACCTGCTTCTCCTGCCGTTGCCTTTGCTAAAAGCG 622678 Query 289205 TCTTACCTGTTCCAGGTGGTCC 289226 ||||||| || ||||| || || Sbjct 622679 TCTTACCCGTACCAGGAGGACC 622700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471791463279082