Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq17 113 6e-19 seq47 105 8e-17 seq26 95.1 1e-13 seq107 86.0 8e-11 >seq17 Length=565816 Score = 113 bits (124), Expect = 6e-19 Identities = 179/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||| || || ||||| | ||| || || ||||||||||||| | |||||||| Sbjct 455845 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAATCCGTTGGAG 455904 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | ||||||||||| || | || | || || || | ||||| | ||||| Sbjct 455905 TAACCGTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 455964 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 |||||||| || | ||||||||| | || || ||||||||| || ||||| || ||| Sbjct 455965 ATGCCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 456024 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 ||||| || |||||||| | | ||||| || || |||| || | | ||||| Sbjct 456025 ATCGAATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGGTGTGCCT 456084 Query 1630306 GCGTTGAAGAGCGTGGG 1630322 || || || || || || Sbjct 456085 GCATTAAATAGAGTAGG 456101 Score = 95.1 bits (104), Expect = 1e-13 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1630076 AGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGACTCGCCGTTGG 1630135 |||| || ||||| |||||||| | |||||| || | | ||| ||||| |||||| | Sbjct 414402 AGCGAGCAGTGTCATTAAAGACTCTGAGCATTGGAATAATGCCATTGGAGGTGCCGTTTG 414343 Query 1630136 TGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGG 1630195 | || || | || | ||| | | | || | ||| || || |||| ||| | ||||| | Sbjct 414342 TTCCTGCGATATAAGAGCCAGAGCCACGAATCTTTTGAGCAGCAACGCCAACACCGCCAG 414283 Query 1630196 CCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGG 1630255 | ||||||||||| | || ||| ||| || ||||||||||| ||||| ||| Sbjct 414282 CAGACTTGGAGATACGAGCACACGTGGTGATAGTATCGTAGATGCCTTCGATACTGTCCT 414223 Query 1630256 CCTTCATGTCCACGAGAAAGCA 1630277 | ||||| | || || ||||| Sbjct 414222 CTTTCATTTGAACAAGGAAGCA 414201 >seq47 Length=189370 Score = 105 bits (116), Expect = 8e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 || ||||| || || ||||| | ||| || || ||||||||||||| || |||||||| Sbjct 153098 TGATCGACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAGTCCGTTGGAG 153157 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 | |||||||| || || | ||| | || || || | ||||| | ||||| Sbjct 153158 TAACCGTTGGTACCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCA 153217 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || || | ||||||||| | || || ||||||||| || ||||| || ||| Sbjct 153218 ATACCACCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCG 153277 Query 1630246 ATCGAGTCGGCCTTCATG 1630263 ||||| || |||||||| Sbjct 153278 ATCGAATCTTCCTTCATG 153295 >seq26 Length=359709 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 57963 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 58022 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| || ||| | || || || | | Sbjct 58023 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGA 58082 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||| ||||| || ||||||| Sbjct 58083 TATCATTGACAAAGGAGTTCAAGATGGACATGGCCTTGTTAGAGATACCGGTATCGGGGT 58142 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | |||||||||||| | || ||||| Sbjct 58143 GGACTTGCTTCAAGACCTTGTAGATGTAAGAGGAGTA 58179 Score = 95.1 bits (104), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| || | | ||| || || || ||||| ||||| || || | || Sbjct 63172 GCTTGGCGAGTTCACCAGGGAGGATGAGACGAACAGCGGTTTGGATTTCACGAGAAGAGA 63113 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | |||| | ||| || ||| | || || || | | Sbjct 63112 TGGTGGAACGCTTGTTGTAAGCAGCCAACTTGGAGGCTTCAGTGGCAATACGTTCAAAGA 63053 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||||||| ||||||| || ||||| | |||||| ||||| || ||||||| Sbjct 63052 TATCATTGACAAAGGAGTTCAAGATGGACATGGCCTTGTTAGAGATACCGGTATCGGGGT 62993 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | || ||||| | |||||||||||| | || ||||| Sbjct 62992 GGACTTGCTTCAAGACCTTGTAGATGTAAGAGGAGTA 62956 >seq107 Length=77526 Score = 86.0 bits (94), Expect = 8e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 || || |||||||||||||| | || ||||||| ||||| | || || |||| Sbjct 39756 TCAAAGAAGTTGGTCTTGCCTTGAAGAGAGATCATGTCCATAAAGTCAAATGGATTGGTA 39815 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | | |||| ||| ||| |||| || | | | ||||| || || || || |||||| Sbjct 39816 GCCATGTAAATCTTGTCGAATCCAAGAGCAACCATGAGGCGATCAGCAACGAATTCGATG 39875 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACA 868897 || |||||||| | | | | |||||||||||||| || || || || | || ||| | Sbjct 39876 TATTGGCACATCAAGGCAGAATTCATGCCGATGAGAGCAACGGGAAGAGCATCCGTCAAA 39935 Query 868898 AACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || || | || || ||| || || | |||||| Sbjct 39936 AATTCCTGTTCAATGCTGACAGCTTCCAAGATGAT 39970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107025458349362