Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 107 2e-18 >seq1 Length=2399970 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || || ||| | |||||||| || ||||| | ||| || || Sbjct 341644 AAAATGCAAATCTTCGTAAAGACTCTTACCGGCAAGACAATTACTTTAGAAGTCGAATCT 341703 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||| | ||| | || || || |||||| || || ||||| | || || Sbjct 341704 TCTGATAGTATCGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGAC 341763 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||| |||||||| | ||| |||||||| || ||||||| | | || | | || ||| Sbjct 341764 CAACAGAGACTTATCTTTGCTGGTAAACAACTCGAGGATGGCCGTACTCTCTCTGACTAC 341823 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| |||||||||||||| | ||| |||| Sbjct 341824 AACATCCAAAAAGAATCTACTCTTCACTTGGT 341855 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| ||| | || || || ||||| ||| | ||| ||| || | Sbjct 342345 ATGCAAATCTTTGTCAAGACTCTTACTGGTAAGACCATCACCTTGGAAGTTGAGTCTTCC 342404 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||| | | | | || || || |||||| || || ||||| | || || ||| Sbjct 342405 GATAGTATTGAAAATGTCAAGCAAAAGATTCAAGATAAGGAAGGTATCCCTCCTGACCAA 342464 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| || |||||||| || || || | | || || ||||| ||| Sbjct 342465 CAACGTCTCATTTTCGCTGGTAAACAACTCGAAGACGGTCGTACTTTGAGTGATTATAAC 342524 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||||||||||||||| | ||| |||| Sbjct 342525 ATTCAAAAAGAATCTACTCTTCACCTGGT 342553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412834626331298