Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 2e-15 >seq4 Length=1094480 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/219 (70%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| || ||||| || ||||||||||| ||| | || |||| Sbjct 349644 AGGACCAAGTGAAGAGTAGATTCCTTTTGGATGTTATAGTCGCTTAGAGTACGGCCATCT 349585 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || ||||| || || || ||||| || ||||| || || | || | || |||||||| Sbjct 349584 TCGAGTTGTTTACCAGCAAAGATGAGACGTTGTTGATCAGGAGGAATACCTTCCTTGTCT 349525 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || |||||||| || || | ||||| ||| | || || || | || || Sbjct 349524 TGAATCTTTTGTTTTAC--AT--TGTCGATAGTGTCAGAAGATTCAACTTCTAAAGTAAT 349469 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 |||||||| || || ||||| |||||||| |||||||| Sbjct 349468 TGTCTTTCCAGTAAGTGTCTTGACAAAGATTTGCATGAT 349430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325687298437934