Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq176 107 2e-18 >seq176 Length=52331 Score = 107 bits (118), Expect = 2e-18 Identities = 179/259 (69%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 168526 AAGAACTTTTATGGGTTATAAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTG 168585 ||||||| | ||| | |||||||| || | ||||| || ||| ||| | | | Sbjct 28396 AAGAACTGCTTTGGTTCATAAAAGGAGATACAAACTCAAAGCATCTAAGTGAAAGAAATA 28337 Query 168586 TTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTACCGAAA 168645 | ||| ||||| | | || |||||||| |||| | | || | ||| |||| | Sbjct 28336 TCAAAATTTGGGATGGCAACGGTTCTCGCGAATATCTCGACAAGTTGGGTCTTACTCACC 28277 Query 168646 GAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAAT 168705 | |||||||| | || ||| | || ||||||||||||||||| || || ||| Sbjct 28276 GTCGTGAAGGTGACCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGCGCCAAAT 28217 Query 168706 ATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAA 168765 | ||||||||||||| ||||| || |||||||| || || |||||| ||| || Sbjct 28216 ACGTTGACTGTGATACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTG 28157 Query 168766 ATACTTTACACAACAATCC 168784 ||||| || | |||||||| Sbjct 28156 ATACTATAAAAAACAATCC 28138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635166595548080