Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq176 100 4e-16 seq13 95.1 2e-14 >seq176 Length=52331 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 180551 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATT 180610 |||||||| | |||||| | || ||||||||||||||||| || || |||| || Sbjct 28271 GAAGGTGACCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGCGCCAAATACGTT 28212 Query 180611 GACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACT 180670 ||||||||||| | |||| || ||||| | || |||||| ||||| || || ||| Sbjct 28211 GACTGTGATACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTGATACT 28152 Query 180671 ATAAAAAATAATCCC 180685 |||||||| |||||| Sbjct 28151 ATAAAAAACAATCCC 28137 >seq13 Length=664605 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 180551 GAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATT 180610 ||||| ||| | |||||| | || ||||||||||||||||| || || |||| || Sbjct 416446 GAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGTT 416505 Query 180611 GACTGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACT 180670 || |||||| | | |||| || ||||| || || |||||| ||||| || || ||| Sbjct 416506 GATTGTGATGCTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTGACACT 416565 Query 180671 ATAAAAAATAATCCC 180685 |||||||| |||||| Sbjct 416566 ATAAAAAACAATCCC 416580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655268647274000