Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq22 113 1e-19 seq346 111 4e-19 >seq22 Length=444912 Score = 113 bits (124), Expect = 1e-19 Identities = 191/275 (69%), Gaps = 9/275 (3%) Strand=Plus/Minus Query 299037 GGTGCATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTG 299096 ||||| || | ||||||| | |||||||||||||||||||||||||| || | | | Sbjct 79079 GGTGCTTTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTC 79020 Query 299097 CTAAAAGAACTAAAGAAACGTGAAAA---TACTATTGTTTTCATTGATGAAATTCATATT 299153 | |||||| | ||| || |||| | || |||| | || ||||||||||| || | | Sbjct 79019 TTGAAAGAAGTCAAGGAATCTGAAGAAGGTATTATTTTGTTTATTGATGAAATCCACACT 78960 Query 299154 ATGGTTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCCA 299213 | |||| || ||| | || | |||||||||||| |||| |||| ||||| Sbjct 78959 GTTCTTGGTGCCGGT---AAAGGTGAGGGTTCTATGGACGCTGCCAATCTGCTGAAGCCT 78903 Query 299214 GCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAACAACATATGATGAATATCGTAAA 299273 || | || ||||| | || ||||| || ||||| | |||||||||| || Sbjct 78902 ATGCTGGCTCGCGGTGAATTGCGATGCATTGGCGCTACAACGCTTACTGAATATCGTGAA 78843 Query 299274 AATATCGAGAAAGATAGTGCATTAACTCGTCGTTT 299308 ||||| |||||| |||||| |||||||| Sbjct 78842 ---ATCGAAAAAGATCCTGCATTCGAGCGTCGTTT 78811 >seq346 Length=25747 Score = 111 bits (122), Expect = 4e-19 Identities = 193/276 (70%), Gaps = 11/276 (4%) Strand=Plus/Minus Query 299037 GGTGCATTGACTGCTGGTACTAAGTATCGTGGTGAATTTGAAGAACGCATCGACAATTTG 299096 ||||| || | ||||||| | |||||||||||||||||||||||||| || | | | Sbjct 16064 GGTGCCTTAATTGCTGGTGCCAAGTATCGTGGTGAATTTGAAGAACGTCTCAAGGCTGTC 16005 Query 299097 CTAAAAGAACT-AAAGAAACGTGAAAA---TACTATTGTTTTCATTGATGAAATTCATAT 299152 |||||||| | |||||| | |||| | || ||| | || ||||||||||| || | Sbjct 16004 TTAAAAGAAGTCAAAGAATC-TGAAGAAGGTATCATTTTGTTTATTGATGAAATCCACAC 15946 Query 299153 TATGGTTGGGGCTGGTTCCGCAAGTAATGGTTCTATGGACATGAGCAATATGCTTAAGCC 299212 | | |||| || ||| | || | |||||||||||| |||| |||| || || Sbjct 15945 TGTTCTTGGTGCCGGT---AAAGGTGAGGGTTCTATGGACGCTGCCAATCTGCTGAAACC 15889 Query 299213 AGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAACAACATATGATGAATATCGTAA 299272 || | |||||||| | || ||||| || |||||| | ||| |||||| | Sbjct 15888 TATGCTGGCTCGTGGTGAATTGCGATGCATTGGCGCTACAACACTTACTGAGTATCGTGA 15829 Query 299273 AAATATCGAGAAAGATAGTGCATTAACTCGTCGTTT 299308 | ||||| |||||| |||||| |||||||| Sbjct 15828 A---ATCGAAAAAGATCCTGCATTCGAGCGTCGTTT 15796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1115151396650434