Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq4 136 6e-27 >seq4 Length=1094480 Score = 136 bits (150), Expect = 6e-27 Identities = 255/373 (68%), Gaps = 4/373 (1%) Strand=Plus/Plus Query 161291 GGTATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTA 161350 ||| | || ||| | || ||| |||| || || || ||| ||| | ||||| ||| Sbjct 432893 GGTTTAACCGATCGTGTTCGTTTCTATCAAGCTTCTACCTCTGAACTCTATGGTAAAGTA 432952 Query 161351 CAAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCT 161410 || ||||| || || ||||||||||| ||||| || || || || ||||| ||||| Sbjct 432953 GTTGAAACACCCCAAAAGGAAACAACACCCTTCTATCCCCGTTCCCCTTATGGTGTAGCC 433012 Query 161411 AAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGT 161470 || || ||||| ||||||||| |||||| | || || ||| ||| || Sbjct 433013 AAGCTTTATGGTTATTGGATTACGGTCAACTACCGTGAATCATACAATATGTTTGCCTGT 433072 Query 161471 AGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAG 161530 | ||||||||| ||||||||||| ||||| || || || || ||||| ||||| ||| Sbjct 433073 AATGGTATTCTCTTCAACCATGAATCACCTCGTCGTGGCCGTACCTTCGTTACCCGAAAG 433132 Query 161531 ATTACTAGGGGACTATCCCGTATTAGTAC--AGGACTACAGGATTGTCTATACCTAGGTA 161588 |||||| | | || || | | || |||| || || || || || || |||| Sbjct 433133 ATTACTCGTG--CTGTCGCAGACATCCACTTGGGACGTCAAGAGTGCCTTTATCTCGGTA 433190 Query 161589 ATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGA 161648 || | | | | || |||||||| |||||| || ||||| || | ||||||| | | Sbjct 433191 ATATTGATGCTAAGCGTGATTGGGGACATGCTCGTGATTATGTCGAAGGTATGTGGCTCA 433250 Query 161649 TGTTACAACAGGA 161661 || | || || || Sbjct 433251 TGCTGCAGCAAGA 433263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729916953969680