Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq22 113 1e-19 seq346 111 4e-19 >seq22 Length=444912 Score = 113 bits (124), Expect = 1e-19 Identities = 191/275 (69%), Gaps = 9/275 (3%) Strand=Plus/Plus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| |||||| |||||| ||||| || |||||||||| | ||||| Sbjct 78811 AAACGACGCTCGAATGCAGGATCTTTTTCGAT---TTCACGATATTCAGTAAGCGTTGTA 78867 Query 332085 GCACCAATTACACGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTCC 332144 || ||||| || | ||||| || | || ||||| |||| |||| |||| Sbjct 78868 GCGCCAATGCATCGCAATTCACCGCGAGCCAGCATAGGCTTCAGCAGATTGGCAGCGTCC 78927 Query 332145 ATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACA 332204 |||||||| | || | ||| || |||| | | | || ||||||||||| || | | Sbjct 78928 ATAGAACCCTCACCTTT---ACCGGCACCAAGAACAGTGTGGATTTCATCAATAAACAAA 78984 Query 332205 ATAGTA---TTTTCACGTTTCTTTAGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAAT 332261 ||| || | |||| || ||| | |||||| | | | | || |||||||||||| Sbjct 78985 ATAATACCTTCTTCAGATTCCTTGACTTCTTTCAAGACAGCCTTGAGACGTTCTTCAAAT 79044 Query 332262 TCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 |||||||||||||| | ||||||| | || ||||| Sbjct 79045 TCACCACGATACTTGGCACCAGCAATTAAAGCACC 79079 >seq346 Length=25747 Score = 111 bits (122), Expect = 4e-19 Identities = 193/276 (70%), Gaps = 11/276 (4%) Strand=Plus/Plus Query 332025 AAACGACGAGTTAATGCACTATCTTTCTCGATATTTTTACGATATTCATCATATGTTGTT 332084 |||||||| |||||| |||||| ||||| || |||||| ||| | |||||| Sbjct 15796 AAACGACGCTCGAATGCAGGATCTTTTTCGAT---TTCACGATACTCAGTAAGTGTTGTA 15852 Query 332085 GCACCAATTACACGAATCTCACCACGTGAAAGTGCTGGCTTAAGCATATTGCTCATGTCC 332144 || ||||| || | |||||||| | || || || |||| |||| |||| Sbjct 15853 GCGCCAATGCATCGCAATTCACCACGAGCCAGCATAGGTTTCAGCAGATTGGCAGCGTCC 15912 Query 332145 ATAGAACCATTACTTGCGGAACCAGCCCCAACCATAATATGAATTTCATCAATGAAAACA 332204 |||||||| | || | ||| || |||| | | | || ||||||||||| || | | Sbjct 15913 ATAGAACCCTCACCTTT---ACCGGCACCAAGAACAGTGTGGATTTCATCAATAAACAAA 15969 Query 332205 ATAGTA---TTTTCACGTTTCTTT-AGTTCTTTTAGCAAATTGTCGATGCGTTCTTCAAA 332260 || || | |||| | |||||| | |||||||| | | | || ||||||||||| Sbjct 15970 ATGATACCTTCTTCA-GATTCTTTGACTTCTTTTAAGACAGCCTTGAGACGTTCTTCAAA 16028 Query 332261 TTCACCACGATACTTAGTACCAGCAGTCAATGCACC 332296 ||||||||||||||| | ||||||| | || ||||| Sbjct 16029 TTCACCACGATACTTGGCACCAGCAATTAAGGCACC 16064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113810620460528