Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq107 233 2e-56 seq176 111 1e-19 seq13 95.1 1e-14 >seq107 Length=77526 Score = 233 bits (258), Expect = 2e-56 Identities = 587/876 (67%), Gaps = 22/876 (3%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||| | || || ||||| | || || ||||||||||| |||||| | |||||| Sbjct 40576 ATCTGGCAATTCTATAAGAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTG 40517 Query 43790 ACTAAAGA-CTTAGCAC-ATTGG-ATTGCATTAAAACC-ACAAGAAAAACAT-TTTATAT 43844 | || || ||| || ||||| | || | ||| | || || | | ||||| | Sbjct 40516 AGCAAGGATCTT--CATGATTGGGAAAACAAGATGACCGAAAACGAACGCTTCTTTATCT 40459 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTT-AGT 43903 || || ||||| || ||||||| || || || || |||||||| |||||| | Sbjct 40458 CTCGCGTCTTGGCCTTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAA 40399 Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 |||| | | ||||| | | || ||||| |||||| ||||| |||||||| Sbjct 40398 ACTTTTGTG-ATGAAGTCAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATG 40340 Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 || ||||| ||||| | |||| ||||||||| |||| || || || ||||||||| Sbjct 40339 ATTGAAAACATTCACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAAC 40280 Query 44024 CACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCA 44083 || ||||| | | ||| ||| || || || | ||| || ||| || || Sbjct 40279 CAAGAGAAAGAAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAAAGAAAGGCT 40220 Query 44084 GACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTT 44143 || |||||| | || ||||| || || | |||||||| || || ||||| || ||| Sbjct 40219 GATTGGGCCTTCAAGTGGATTTCCTCTAACGGTTCTTTTGCTGAGCGTCTTGTTGCCTTT 40160 Query 44144 GCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAA 44203 || | ||| ||||| || ||||| || || || ||||| |||| |||||| | |||||| Sbjct 40159 GCTGCTGTCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATTTTTTGGCTCAAGAAA 40100 Query 44204 CGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTA 44263 || |||||||||||||| ||||| || ||||| || || |||||||||||||| | Sbjct 40099 CGTGGTTTGATGCCTGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGCCTT 40040 Query 44264 CATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTC-ATGTAA 44322 ||| || |||||||| | ||| || |||| | ||||| | | | || Sbjct 40039 CATACTGACTTTGCTTGTCTTTTATTTACCCATCTTCG------TAAGCGTCCTAGCCAA 39986 Query 44323 GA--CAATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACA 44380 || | | ||||| | | || || || | || ||||| |||||| |||| Sbjct 39985 GAACGCGTCAAGGATATCATCTTGGAAGCTGTCAGCATTGAACAGGAATTTTTGACGGAT 39926 Query 44381 GCATTACCTGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATAC 44440 || | || || | | || || |||||| |||||| |||||| || |||| | Sbjct 39925 GCTCTTCCCGTTGCTCTCATCGGCATGAATTCTGCCTTGATGTGCCAATACATCGAATTC 39866 Query 44441 ATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTG-TACAAAACCC 44499 |||| ||||| | | | | || || | ||| || || || | ||| || || Sbjct 39865 GTTGCTGATCGCCTCATGGTTGCTCTTGGATTCGACAAGATTTACATGGCTAC-CAATCC 39807 Query 44500 GTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGT 44559 ||||| |||||||| | || || | ||||||| || ||||| |||||||| || || Sbjct 39806 ATTTGACTTTATGGACATGATCTCTCTTCAAGGCAAGACCAACTTCTTTGAAAAGCGTGT 39747 Query 44560 TGGAGAATATCAGCGAATGGGCGTCATGATAACAAG 44595 || ||||| || || |||||| |||||| Sbjct 39746 CTCTGACTATCAACGTGCTGGTGTCATG--AACAAG 39713 >seq176 Length=52331 Score = 111 bits (122), Expect = 1e-19 Identities = 273/415 (66%), Gaps = 23/415 (6%) Strand=Plus/Minus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 ||||||||| ||||| || || || |||||||| | | |||| ||||| || ||||| | Sbjct 28272 TGAAGGTGACCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGCGCCAAATACGT 28213 Query 40922 C-ACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 ||| || | |||||||||| |||| | ||||||||||| || || |||| Sbjct 28212 TGACTGTG-ATACTGATTATACAGGACAAGGCGTTGATCAATTACAACAAGTGATTGATA 28154 Query 40981 CGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACG 41040 | || ||| | ||||| | || | || || ||| || |||||||| | || Sbjct 28153 CTATAAAAAACAATCCCACTGATCGTAGAATCATTCTGTCAGCATGGAACCCTGCAGATA 28094 Query 41041 TACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA------ 41094 | | | | ||||| ||||||||||||||| || ||||||||||| || | | Sbjct 28093 TTCCTATCATGGCTTTGCCACCTTGTCATGCTTTTTGTCAGTTTTATGTATCTAATCCAC 28034 Query 41095 ------ATGGTG---------AACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGG 41139 || ||| | || || ||| | |||||| | || | || |||| Sbjct 28033 CACAGGATAGTGGACGTGCCAAGCTATCTTGTGTGCTCTATCAACGTTCTTGCGATATGG 27974 Query 41140 GACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACG 41199 |||| ||||| || || || || || |||||| || | || |||||||| || | Sbjct 27973 GACTGGGGGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTGCGCATG 27914 Query 41200 TTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 | || || | ||||||||||||| | || || | || ||| |||| |||| Sbjct 27913 TAACAGATCTTGAACCTGGTGAATTCATACATACAATGGGCGATACACATGTTTA 27859 >seq13 Length=664605 Score = 95.1 bits (104), Expect = 1e-14 Identities = 275/418 (66%), Gaps = 29/418 (7%) Strand=Plus/Plus Query 40862 TGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGA 40921 |||||| |||||||| || || || |||||||| | | |||| ||||| || ||||| | Sbjct 416445 TGAAGGCGATCTTGGACCAGTCTACGGATTTCAATGGAGACACTTTGGTGCCAAATACGT 416504 Query 40922 CACTATGTACT-CTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATA 40980 | ||| | |||||||||| |||| || ||||||||||| || || || | Sbjct 416505 TGAT-TGTGATGCTGATTATACAGGACAAGGCATTGATCAATTACAACAAGTGATTGACA 416563 Query 40981 CGATTAAATCCGATCCC---GATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGG 41037 | || ||| | ||||| ||| || || || || | | || |||||||| | | Sbjct 416564 CTATAAAAAACAATCCCACTGATCGCAGA---ATCATTCTATCAGCATGGAACCCTGCAG 416620 Query 41038 ACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTT------ 41091 | | | | | ||||| || |||||||||||| || ||||| ||||| || | Sbjct 416621 ATATTCCTATCATGGCTTTACCACCTTGTCATGCCTTTTGTCAATTTTATGTATCTAATC 416680 Query 41092 ----GCA--ATGGTGAAC-TGTCATGTCA-ATTG-------TATCAAAGATCAGGTGACA 41136 ||| |||| | || || || || | ||| |||||| | || |||| | Sbjct 416681 CACCGCAGGATGGCGGACGTGCCAAGTTATCTTGTGTGCTCTATCAACGTTCTTGTGATA 416740 Query 41137 TGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCAC 41196 |||| || || || || || || || || |||||| || | || |||||||| | Sbjct 416741 TGGGGCTGGGTGTTCCTTTCAATATTGCTTCTTATGCACTTTTGACACGCATGATTGCGC 416800 Query 41197 ACGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTA 41254 | || || || | | ||||||||||| | || || | || ||| |||| |||| Sbjct 416801 ATGTAACAGATCTTGATCCTGGTGAATTCATACATACAATGGGCGATACACATGTTTA 416858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449286222930