Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq17 269 3e-67 seq47 215 6e-51 seq16 127 3e-24 seq345 118 1e-21 seq2 86.0 8e-12 >seq17 Length=565816 Score = 269 bits (298), Expect = 3e-67 Identities = 1115/1730 (64%), Gaps = 38/1730 (2%) Strand=Plus/Plus Query 110363 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAG 110422 ||||| || ||||| || ||||| | ||| | || ||| | || | |||||| | | Sbjct 454489 CGGAGGTAATACATGCCTGTCTTTAATCCCTTTTGCCAACCATAAAAGTGCATACTGGTG 454548 Query 110423 AGCTTGGACATCGTTGGACTTT-CCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAA 110481 ||||| || ||||| | |||| |||| ||||| |||||||||||||||||| | Sbjct 454549 AGCTTAC-CAAAGTTGGGTTCAGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATA 454607 Query 110482 GCGCCCC-CGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTCCCAAACTG 110537 ||| || || | || ||||| ||||||| | | | | | | |||||||| || | Sbjct 454608 -CGCACCACGATCAGCAGCCATGTCAATGA--TGGTACGT-TGAGAGATTTCCCAGACGG 454663 Query 110538 TGCGATAGAGATTCTTGATATCATCTGGGATATCTGAG-ATATTCTGGATGGAACCCCCC 110596 | ||||||| || | | | ||||| ||| | | ||||| || || || || Sbjct 454664 TCTTGTAGAGATCTTTCAAGTTTTGAGGGATG-CTGGGCACGTTCTGAATAGATCCTCCG 454722 Query 110597 ---GCCTTCACCATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCA 110653 ||| | | |||| | ||||| ||| | ||||||||| || | || ||| Sbjct 454723 TCAGCCATGATCATG---TTCTTCACATCGTCATTCCAGAGACCCATATCGACCAGATCA 454779 Query 110654 TTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATG 110713 || | ||||| || | ||||||| ||| | | || | | Sbjct 454780 CGGAGTAACCAAGGATTGACCATTTGGTATTCACCTGAGAGCACACGACGGGTATAAAAG 454839 Query 110714 TTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTT 110773 || | |||||| |||||||| || ||||| ||| | ||||| | ||||| || || Sbjct 454840 TTGGATGTGTAAGGTTCAAAACACTCATTGAAACCGAGCATTTGAGAAGTGGAAGCAGTA 454899 Query 110774 GGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGA 110833 ||||| || || | || ||| |||||| | ||| | || || ||||||||| Sbjct 454900 GGCATAGGAGCAACCAGCAGAGAGTTACGGACACCATGCTTGGCAATCTTTTCCTTGAGT 454959 Query 110834 ACATCCCAGTCGTAGTTGA--GCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCC 110891 | ||||||| || || | | ||| | || |||| ||||||| | || || | | Sbjct 454960 GCGGCCCAGTCCCAGA-GATTGGTAGGTGTGACATTCC-ACATGTCGTATTGCAGGATAC 455017 Query 110892 CTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCAC 110951 | | ||| | ||| || ||| ||||||| |||| || | ||||||||| || | Sbjct 455018 CCTTGGATACAGGACTGCCTTCATAGGTTTCGTAGGGTCCATACTTTTCAGCCAACTCGC 455077 Query 110952 AGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGG 111011 || || |||| || || || || |||||||||||||| || |||| || ||||| Sbjct 455078 AGGAGGCTTCCAAGGCAGCATGGTAGATGGTTTCAAAGATTTGAATGTTCAGCTGCTTGG 455137 Query 111012 CTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACAC 111071 ||||| |||||| |||| ||||| || || || || | |||||||||| Sbjct 455138 CTTCAGGTGAATCGAATGGATAGCGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACAC 455197 Query 111072 CCAAACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAA 111130 | |||||||| ||||| |||| | | || || |||||| || || || || || Sbjct 455198 CTAAACCAATCGGTCTATGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGGTAGTAA 455256 Query 111131 TTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTT 111190 || | || |||| ||| | ||| | || | || ||| || | || || |||||| Sbjct 455257 TTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTT 455316 Query 111191 TCATAATCAAAAGTGCGAGTCTCT-TCATTGACATACTTTGGAAGGGCGATTGATGCCAA 111249 | ||||| | | ||||| | | | ||||| | || || || || || ||||| Sbjct 455317 TGGAAATCA----TACTTTTCTCTATTAATCACATAGGTAGGCAGAGCAATGGAGGCCAA 455372 Query 111250 ATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGA 111309 || || ||||| || || | | ||| || | |||||||||||| | |||| Sbjct 455373 GTTACAGACAGCGACTTCGTCAGGACTCGAGTATTCAACAATTTCTGTACACAGGTTGCT 455432 Query 111310 ACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 | || ||||| ||||| || | || |||||||| |||| || |||||||| ||||| Sbjct 455433 GCATTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAG 455492 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGG 111428 ||| | || | || |||||||| || | | | ||| || | ||| | | | | | Sbjct 455493 TATGAACGGATTACCTGTCTCCGTTTGAGCCTCCAAAATGGCATACCACAGCTTTTGAGC 455552 Query 111429 CTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACT 111488 || | | | | | || | ||| || ||||| ||| ||||| || |||||| Sbjct 455553 CTTG-ATTGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACT 455611 Query 111489 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGAC 111548 | |||||| || | || || |||| | ||||| || |||||||| | || Sbjct 455612 CATCACCCCAAATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACAGAGACCAATCAC 455671 Query 111549 CACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC 111608 |||| || || |||| |||||| || || |||||||| || | | || ||||| | Sbjct 455672 CACCGTCTCTGACACGCTGCATGAAGAGATCAGGAATCCAGAGAGCATAGAACAGATCGC 455731 Query 111609 TA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 111667 | | | || || || | || ||| ||| || || | || | || || Sbjct 455732 GAGCTCTGA-TTTCGTCTTTGCCAAAGTTTTTTCGCAAATCTAAAAAGGTGAAAATGTCT 455790 Query 111668 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---ACGCCCAGCTTGATTT 111724 || ||||| || || | || | ||||| | ||| || | || |||||| Sbjct 455791 GCATGCCAGGGTTCCAAGTACATTGCGAATGCGCCCGGACGTTTATTACCGCCTTGATCG 455850 Query 111725 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATTGACC 111783 ||||| || || || ||| || || || ||||| || | |||| || | || | ||| Sbjct 455851 ACATAACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAGTAAT-CCGTTGGAGTAACC 455909 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || |||| ||| | | || | | | || |||| || ||||| || Sbjct 455910 GTTGGTGCCGGCAATATATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATGCC 455969 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 || || ||| |||||||| ||||| | || || |||||||||| | ||| || Sbjct 455970 GCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGA 456029 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 111963 || ||||| ||| || | ||||||| ||||| || || | ||||| || ||||| Sbjct 456030 ATCTTCCTTCATGGTGAGCAAGAAGCAAGAAGACATTTGGGGACGAGGTGTGCCTGCATT 456089 Query 111964 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAA 112023 || || || || | ||||| |||| | || ||||||| || ||||||||| | Sbjct 456090 AAATAGAGTAGGACTAGCGTGTGTGAAGTATCTTTCGGACATCAAGTTGTATGTCTCAAT 456149 Query 112024 GACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACA 112073 | | |||||| || || ||||| |||||||| || ||||||| || Sbjct 456150 AGCTGCATCAATATCGGTTCCATGGATACCGATTGCAACACGCATGATCA 456199 >seq47 Length=189370 Score = 215 bits (238), Expect = 6e-51 Identities = 728/1121 (65%), Gaps = 26/1121 (2%) Strand=Plus/Plus Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020 ||| || ||||| || |||||||||||||| || |||| || |||||||||| || Sbjct 152340 CCAAGGCAGCGTGGTAGATGGTTTCAAAGATTTGAATGTTCAACTGCTTGGCTTCAGGTG 152399 Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080 | || |||| || || || || | || || | ||||||||||| ||||||| Sbjct 152400 AGTCGAATGGATAACGAAGAGCCATGAAAGCGTCGGCTAAGCCTTGAACACCTAAACCAA 152459 Query 111081 TAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 111139 | |||||||||| | | || || |||||| || || || || |||| | || Sbjct 152460 TCGGTCTGTGTCTCTTGTTGGATCTTTCG-GCTTCGATGACAGGGTAGTAATTGATATCG 152518 Query 111140 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 111199 |||| ||| | ||| | || | || ||| || | || || ||||||| ||||| Sbjct 152519 ATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACATCGTGCAGTTTTTGGAAATCA 152578 Query 111200 AAAGTGCGAGTCTCTTCATTGA---CATACTTTGGAAGGGCGATTGATGCCAAATTGCAA 111256 | | ||||| ||||| |||| | || || || || || ||||| || || Sbjct 152579 TACTTT----TCTCT--ATTGATCACATAGGTAGGCAGAGCAATGGAGGCCAAGTTACAG 152632 Query 111257 ACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTA 111316 ||||| ||||| | | ||| || | |||||||||||| | ||| | ||| Sbjct 152633 ACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTGTACACAGATTGCTGCACTTG 152692 Query 111317 ATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAG 111376 ||||| ||||| || | || |||||||| |||| || |||||||| ||||| ||| | Sbjct 152693 ATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAGCATCCTTATAGAGTATGAAC 152752 Query 111377 GGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTAC 111435 || | || |||||||| || | || | ||| || | ||| | | | | | || | | Sbjct 152753 GGATTACCTGTCTCCGTTTGAGCTTCCAAAATGGCATACCATAGCTTTTGAGCCTTG-AT 152811 Query 111436 AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 111495 | | | || | ||| || ||||| ||| ||||| || ||||||| ||||| Sbjct 152812 TGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGAGAGCAACAAACTCGTCACC 152871 Query 111496 CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTC 111555 | || | || || || | | ||||| || |||||||| | |||||| || Sbjct 152872 CCAGATTTCATGTAATCCAGGAGCTTCATTGGGACAAAACAGAGACCAATCACCACCGTC 152931 Query 111556 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACC 111614 || |||| ||||||||| || |||||||| || | | || ||||| | | | | Sbjct 152932 TCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCATAGAACAGATCACGAGCTCT 152991 Query 111615 GAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCC 111674 || || || | || ||| |||||| || | || | ||||| || |||| Sbjct 152992 GA-TTTCGTCTTTGCCAAAGTTTTTTCGTAAGTCTAAAAAGGTGAAAATATCTGCATGCC 153050 Query 111675 ATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACAT 111728 | || || | || | ||||| | ||| ||||| || |||||| |||| Sbjct 153051 AGGGTTCCAAGTACATTGCGAATGCGCCC---GGACGCTTATTACCGCCTTGATCGACAT 153107 Query 111729 AGCGCGCTGTGGCGTTAAATACGCGAAGCATTGG-AATAATACCATCTGATTGACCATTT 111787 | || || || ||| || || || ||||| || |||| | || | || | ||| || Sbjct 153108 AACGAGCCGTATTGTTGAAAACACGGAGCATGGGCAATAGT-CCGTTGGAGTAACCGTTG 153166 Query 111788 GTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCA 111847 || || ||| ||| | | || | | | || |||| || |||||||| || Sbjct 153167 GTACCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTCAAGCCAATACCACCT 153226 Query 111848 GCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCC 111907 || ||| |||||||| ||||| | || || |||||||||| | ||| || || Sbjct 153227 GCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATACCTTCGATCGAATCT 153286 Query 111908 TCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAG 111967 ||||| ||| || | ||||||| |||||||| || | ||||| || ||||| || Sbjct 153287 TCCTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTGTGCCTGCATTAAAT 153346 Query 111968 AGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACA 112027 || || || | ||||| | || | || |||||| || ||||||||| | | Sbjct 153347 AGAGTAGGACTAGCGTGTGTAAAGTATCTTTCAGACATCAAGTTGTATGTCTCAATAGCT 153406 Query 112028 GAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCAT 112068 | |||||| || || ||||| ||||| || || ||||| Sbjct 153407 GCATCAATATCGGTTCCATGGATACCGATCGCAACACGCAT 153447 >seq16 Length=608225 Score = 127 bits (140), Expect = 3e-24 Identities = 215/307 (70%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556 ||| ||| | || | ||| ||||||||||| || |||||||||| ||| |||||||| Sbjct 527047 AGTCGATAAAGTTGATGATCAGACCCTTGATATGTGAACCATCATGATCTTGATCTGTCA 526988 Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616 | ||||| | ||||||||| || | ||| |||| || || | ||| || || |||| Sbjct 526987 TGATCATCAAACGACCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 526928 Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGT--TTGATGTAAGCTGTGCCACCGA 182674 ||||||| || ||||| | |||| || | | || ||| || | || || Sbjct 526927 GACCAAGAATAGCCTTGATGTTTTTGATTTCTTCATTCTTCATG--AGTTCAGCATTAGA 526870 Query 182675 AGCGTCCCGAACATTCTTACATTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACC 182734 | | || ||||| ||| |||||| |||| ||||| ||||| |||| |||||||| Sbjct 526869 AACATCACGAACGTTCAATAGTTTACCACGAATGGGGAAAACACCATAGTAGTCACGACC 526810 Query 182735 AACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGA 182793 ||| || || | ||| | ||| | || | || || |||||||| || |||| || | Sbjct 526809 AACTACTGACATACCACTCAA-GACAAGCGACTTGGCTGAATCACCTTCTGTGATTATCA 526751 Query 182794 GAGTACA 182800 ||||||| Sbjct 526750 GAGTACA 526744 >seq345 Length=25863 Score = 118 bits (130), Expect = 1e-21 Identities = 213/306 (70%), Gaps = 4/306 (1%) Strand=Plus/Plus Query 182497 AGTGGATCATATTTAGGATGAGACCCTTGATGTGAGAACCATCATTATCGGCATCTGTCA 182556 ||| ||| | || | ||| |||||||||||||| ||||| |||| ||| |||||||| Sbjct 12249 AGTCGATAAAGTTGATGATCAGACCCTTGATGTGTGAACCGTCATGATCTTGATCTGTCA 12308 Query 182557 TAATCATAAGACGACCATAGCGAAGTTCAGAAACATCTTGGTAGTCTTTTCCTTGTTGAA 182616 | ||||| | ||| ||||| || | ||| |||| || || | ||| || || |||| Sbjct 12309 TGATCATCAAACGGCCATATCGTAACTCATCAACACTTTCATACTTTTTACCATGCTGAA 12368 Query 182617 GACCAAGGATCTTCTTGAGATCATTGAACTCCTGGTTTGATGTAAGCTGTGCCACCGAAG 182676 ||||||| || ||||| | |||| ||| | ||| | || | || ||| Sbjct 12369 GACCAAGAATAGCCTTGATGTTTTTGATCTCTTCATTTTTCATGAGTTCAGCATTAGAAA 12428 Query 182677 CGTCCCGAACATTCTTACA-TTTACCGCGAAGTGGGAACACACCGTAGTGATCACGACCA 182735 |||| || || ||| ||| |||||| || | ||||| ||||| |||| |||||||| Sbjct 12429 CGTCACGGACGTTC-AACAGTTTACCACGGATGGGGAATACACCATAGTAGTCACGACCC 12487 Query 182736 ACGACAGAGAGACC-CGCAACCGCGAGGGTTTTCGCCGAATCACCCTCCGTGACAATGAG 182794 || || || | ||| | ||| | || | || || |||||||| || |||| || || Sbjct 12488 ACTACTGACATACCACTCAA-AACAAGCGACTTGGCTGAATCACCTTCTGTGATGATCAG 12546 Query 182795 AGTACA 182800 ||| || Sbjct 12547 AGTGCA 12552 >seq2 Length=1834001 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 170027 GCAAAGCATAACAGCGAACAAGATTGTTGGGTCATAATCAAGGACATTGTTTATGACCTC 170086 ||||||||||||| | | ||||| ||||| | |||| | | || | || || Sbjct 1114898 GCAAAGCATAACAAGCCAGATGATTGCTGGGTTGTTGTCAATGGCCAAGTCTTGGATGTC 1114957 Query 170087 ACAAAATTCCTTCCAGATCACCCCGGTGGTAAGAAGGCGATCATGCTCTTTGCTGGCAAA 170146 ||| | |||||||| || ||||| ||||| |||||||| ||| || ||| |||||| Sbjct 1114958 ACAGACTTCCTTCCTGACCACCCTGGTGGAAAGAAGGCTATCTTGATCTATGCTGGTCGT 1115017 Query 170147 GATGCAACTGAAGAGTTTGATATGCTTCAT 170176 |||||||| |||||||| | ||| | ||| Sbjct 1115018 GATGCAACAGAAGAGTTCAACATGATGCAT 1115047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628021119345600