Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq107 219 4e-52 seq76 102 8e-17 seq45 98.7 1e-15 >seq107 Length=77526 Score = 219 bits (242), Expect = 4e-52 Identities = 316/444 (71%), Gaps = 4/444 (1%) Strand=Plus/Plus Query 23498 TAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAG 23557 |||| || | ||| ||||| ||| ||| ||||||||||| | || ||||||||||| Sbjct 40012 TAAATAAAAGACAAGCAAAGTCAGTATGAAGGCCTTCATCACGACAGATCAATTCATTGC 40071 Query 23558 AAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATC 23617 ||||| || || ||||| || || ||||| || | |||||| || | |||||| || | Sbjct 40072 TGAATGTCAAACCAGGCATCAAACCACGTTTCTTGAGCCAAAAAATGGAAGCAAAGGAAC 40131 Query 23618 CGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCAT 23677 | || ||||| ||||| || ||||| |||||||| |||||||| | |||| | | | Sbjct 40132 CAGAGAAGAAGATACCTTCGACAGCAGCAAAGGCAACAAGACGCTCAGCAAAAGAACCGT 40191 Query 23678 TATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTT 23737 || | |||||||| || | ||||| |||||| ||| | ||| || || | Sbjct 40192 TAGA---GGAAATCCACTTGAAGGCCCAATCAGCCTTTCTTTTGATACAAGGGATAGTGT 40248 Query 23738 CAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTA 23797 |||| || ||||| | ||| |||| |||||| | ||||| || ||||| | | Sbjct 40249 CAATAGCAGAAAAGAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAA 40308 Query 23798 AACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAG 23857 ||| || |||| | ||||| |||||||| || ||||| ||||| |||||| ||| Sbjct 40309 GACTGTAAGTTTCTGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAG 40368 Query 23858 CTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCAT 23917 |||||| | | || |||| | |||| ||| | | || ||||| |||||||| |||| Sbjct 40369 CTTCAGGAATCTTGACTTCATCACAAAAGTTTTGAACCAAGTTTTCATTAACAATGCCAT 40428 Query 23918 CACTAGCAGCAAAGAAAG-CAAGA 23940 | | |||||||||| | ||||| Sbjct 40429 CTGAACCAGCAAAGAAGGCCAAGA 40452 >seq76 Length=107931 Score = 102 bits (112), Expect = 8e-17 Identities = 65/70 (93%), Gaps = 2/70 (3%) Strand=Plus/Minus Query 8541 TCCTGACCTCATGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGA 8600 |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 30059 TCCTGACCTC--GTGATCCACCAGTCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGA 30002 Query 8601 GCCACCGCGC 8610 ||||||| || Sbjct 30001 GCCACCGTGC 29992 >seq45 Length=191388 Score = 98.7 bits (108), Expect = 1e-15 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 8349 CTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCCGCTCACTGCAACCTCCGCCTCC 8408 |||||| |||||||||||||||||||||| |||| ||||||| ||||||| |||||| Sbjct 147458 CTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTTCGCTCACCACAACCTCTGCCTCC 147399 Query 8409 CGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGT 8445 ||| |||||| ||| | || ||||| ||| | |||| Sbjct 147398 CGGATTCAAGTGATTATTCTTCCTCAACCTACCGAGT 147362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521478965220400