Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq135 150 4e-31 seq7 149 1e-30 seq106 116 8e-21 seq148 89.7 1e-12 >seq135 Length=64565 Score = 150 bits (166), Expect = 4e-31 Identities = 778/1212 (64%), Gaps = 52/1212 (4%) Strand=Plus/Minus Query 318485 TAATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCT 318544 ||| || |||||||| || ||| | | ||| | || |||| || |||||| | Sbjct 21256 TAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCGAGAGATT 21197 Query 318545 CGCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCATAGA 318603 | || || | | ||||| |||||||| | ||| | || ||| ||| |||| ||| | | Sbjct 21196 CACGATCCAAATAATTGGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCACATA 21138 Query 318604 GCAGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGA 318663 ||||| ||||| ||||| || | |||||| || ||||| |||||||| || ||||| ||| Sbjct 21137 GCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACGAGAGTGA 21078 Query 318664 GTTGTAAATTCAGGGTCGAGCCCAACATTTGCCATATGTTCTTCCACGTTCTTTGCGGTC 318723 || | ||||| || || || ||||| | |||| || | ||| | | ||| || ||| Sbjct 21077 GTAGCGAATTCGGGTTCAAGACCAACTTCGGCCAAGTGCTTTTCGATTTCCTTGGCAGTC 21018 Query 318724 AGTGGCTTGAACATACC-AT-TTGCAACGGCTTCTTTGGTATCAATATCG--TTCAGAAG 318779 | || | | ||| || ||| | ||||| | || |||| ||||| | Sbjct 21017 AAAGGACGGTTAAGACCCATCTTGGCA--GCTTC------AGCAGCATCGACTTCAGCAA 20966 Query 318780 TTTTC----CGAAACCATACTCCTCCAGGCGTTCG--CGGGACATCCATTGGGTAGTCTC 318833 | ||| ||||||| | | || || || || | || || ||||| | || ||| Sbjct 20965 TCTTCTTACCGAAACCC-ATTTCTTCAAGC-TTGGAACGAGAGATCCAA-GTGTTGTCAA 20909 Query 318834 ------ATCGTTTTTCCACTGA-ACCTCGTACTCGTAAGATTTTTTCAGCTTGCGGCGAC 318886 | || || || || ||||| ||||| |||| || ||||| || |||| Sbjct 20908 CAGAGGAGCGACCGACCCAAGAGACTTCGTATTCGTAGGATTGCTTGAGCTTACGACGAC 20849 Query 318887 CAAGAATCTTGTCAAGAATTTTCTTCACTCCGTCAACGACTTTAG---TGTCATACATCT 318943 ||| ||| |||| || ||| | || |||| || || ||| | ||| Sbjct 20848 CAACAATAGCTTCAACAACACGCTTTTCACCTTCAATCACGA-AGACTTGT--TCCATGG 20792 Query 318944 TCTTTAGTTCTTCTTCGTTGTTCTTCCTAGAAACGACGTCAAGGGTCTCTTTG---TCTT 319000 |||| | | ||||||| ||| || | | | | | || |||| |||| Sbjct 20791 CCTTTTGGTTTTCTTCGGCGTTGTTAC--GTTCGTTCTTTTCGAGT-TCTTCACGATCTT 20735 Query 319001 CACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATCCTCGA 319060 |||||| | |||||||||||||| || | |||||| || |||| | ||| |||| Sbjct 20734 CACCGGTGTGGTAACGCCATTGGATGTATTCGTTGGGGGTTTTGTCCAAGTGACGTTCGA 20675 Query 319061 TGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCAAACAC 319120 |||||||||||||||| || || || || |||| ||||| || ||||| |||| ||| Sbjct 20674 TGTGGTGGAAAGCATGTTGGGCGACATAGGCAATACGCAAGTTAGGATGTCTCCAGACAG 20615 Query 319121 TACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTTTTCCCCGCAC 319180 |||| | || || |||| || || | || ||| || | |||| || || |||| Sbjct 20614 TACCAACCTCGGACTCGATTTCACCAGTCAACAACTTGATCAAGGTGGACTTACCAGCAC 20555 Query 319181 CGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCATTCACGTTGTCAA 319240 |||| || | || | | | ||| || || || | |||| | | |||| | Sbjct 20554 CGTTGGGACCAATGACGGCAACACGAGAGGCAAGAGA-ACAT-TGCATAGA-GATGTCGA 20498 Query 319241 AGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTAGCTTCATGATGG 319297 | | | || || | ||| || || | ||| | || | ||||| ||| | Sbjct 20497 TCAATTGCTTGCGGTCAGAACCAGGGTATTGGAAGTCGACGTTCTTCATCTTCAAGATAG 20438 Query 319298 CACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCT 319357 |||| ||||| | ||||||| || | ||| || || || ||||| || || | | Sbjct 20437 CACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGTTCAGGGAAAGAGAACTTGATTT 20378 Query 319358 TCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACA 319417 || | | || ||||||| || | ||| |||||| ||||| ||||||| Sbjct 20377 GAGTAGCTTCCAAGGAGTAGTAAGAAGCAGCACGAGGAACCTTCTTGACGAATTCGGACA 20318 Query 319418 GATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAA 319477 || ||||| || ||| ||||| ||| || ||||| || || || || || | Sbjct 20317 AGTTACCCTTATAACGCTTGAGCTTGTAGTTGGGCTCGTAGTGAATGATGTCGGAACAGA 20258 Query 319478 CAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGA 319537 || || | ||| || |||||||| || ||||| | | | | ||| ||| | | Sbjct 20257 CATGATCCAAGAAACCAGAGTCGTGGGAAACAATGATGGAGGTAACAGTCTTCAAACCAA 20198 Query 319538 TCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTGGTCGGCTCGT-C 319595 ||||| | |||||| ||||| ||| ||| | || ||||| || |||| | Sbjct 20197 GGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTGGTAGGTTCGTCC 20139 Query 319596 AAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCA 319655 || ||| || | | ||||||| | ||| ||||| |||||||| || ||||| ||||| Sbjct 20138 AACAAG-AGGATATCAGCGTTCATCAACATAGCACGGGCAAGAGCAAGCTTCATCTTCCA 20080 Query 319656 CCCTCCGGAAAG 319667 || || || || Sbjct 20079 ACCACCAGAGAG 20068 >seq7 Length=279440 Score = 149 bits (164), Expect = 1e-30 Identities = 784/1224 (64%), Gaps = 76/1224 (6%) Strand=Plus/Minus Query 318485 TAATGACCACAACACCTCCGCCAAAGTTCTTAAGTGCTTCGGCCATTGCTCCGAGACTCT 318544 ||| || |||||||| || ||| | | ||| | || |||| || |||||| | Sbjct 49984 TAACGATGACAACACCACCACCATATTCCTTGATAGCAGTAGCCAAAGCACCGAGAGATT 49925 Query 318545 CGCGGTCAACGAAGTTGGTCGGTTCGTCCAAAACGATCACGTGGGGT-TGTTGCCATAGA 318603 | || || | | ||||| |||||||| | ||| | || ||| ||| |||| ||| | | Sbjct 49924 CACGATCCAAATAATTGGTAGGTTCGTCAAGAACAAGCATGTGAGGTCTGTT-CCACATA 49866 Query 318604 GCAGCGCCAATAACCAATTTCAGCTTTTGCCCGCCAGATAGACCACGAATGCGAGAATGA 318663 ||||| ||||| ||||| || | |||||| || ||||| |||||||| || ||||| ||| Sbjct 49865 GCAGCACCAATGACCAACTTGACCTTTTGACCACCAGAGAGACCACGGATACGAGAGTGA 49806 Query 318664 GTTGTAAATTCAGGGTCGAGCCCAACATTTGCCATATGTTCTTCCACGTTCTTTGCGGTC 318723 || | ||||| || || || ||||| | |||| || | ||| | | ||| || ||| Sbjct 49805 GTAGCGAATTCGGGTTCAAGGCCAACTTCAGCCAAGTGCTTTTCGATTTCCTTGGCAGTC 49746 Query 318724 AGTGGC---TTGA-ACATACCATTTGCAACGGCTTCTTTGGTATCAATATCG--TTCAGA 318777 | || |||| || | | || ||| ||||| | || |||| ||||| Sbjct 49745 AAGGGACGATTGAGACCCATC-TTGGCA---GCTTC------AGCAGCATCGACTTCAGC 49696 Query 318778 AGTTTTC----CGAAACCATACTCCTCCAGGCGTTCG--CGGGACATCCATTGGGTAGTC 318831 | | ||| ||||||| | | || || || || | || || ||||| |||| | Sbjct 49695 AATCTTCTTACCGAAACCC-ATTTCTTCAAGC-TTGGAACGAGAGATCCA---GGTATTG 49641 Query 318832 TCATC-GTTTTTCCACTGAACC--------TCGTACTCGTAAGATTTTTTCAGCTTGCGG 318882 ||| | | | || || || ||||| ||||| || | || ||||| || Sbjct 49640 TCAACAGAGGAGCGACCGACCCAAGAGACTTCGTATTCGTAGGACTGCTTGAGCTTACGA 49581 Query 318883 CGACCAAGAATCTTGTCAAGAA-----TTTTC---TTCACTCCGTCAACGACTTTAGTGT 318934 ||||| | || |||| || ||||| ||| || ||| ||||| || Sbjct 49580 CGACCCACGATGGCTTCAACAACACGCTTTTCACCTTCGATCA--CAAAGACTT--GTTC 49525 Query 318935 CATA-CATCTTCTTTAGTTCTTCTTCGTTGTTC--TTCCTAGAAACGACGTCAAGGGTCT 318991 |||| | | || || |||||| ||||||| ||| | | | | || | Sbjct 49524 CATAGCCTTTTGGTT--TTCTTCGGCGTTGTTACGTTCGTT-------CTTTTCGAGT-T 49475 Query 318992 CTTT---GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAA 319048 ||| ||||||||| | | |||||||||||||| || | |||||| || |||| | Sbjct 49474 CTTCACGGTCTTCACCAGTGTGGTAACGCCATTGGATGTATTCGTTGGGGGTTTTGTCCA 49415 Query 319049 GATGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGAT 319108 ||| |||||||| ||||||||||| || || || || |||| ||||| || |||| Sbjct 49414 AGTGACGTTCGATGTGATGGAAAGCATGTTGAGCGACATAGGCAATACGCAAGTTAGGAT 49355 Query 319109 GCTTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGC 319168 | |||| ||| |||| | || || |||| || || | || ||| || | ||| Sbjct 49354 GTCTCCAGACAGTACCAACCTCGGACTCAATTTCACCAGTCAACAACTTGATCAAGGTAG 49295 Query 319169 TTTTCCCCGCACCGTTTTCGCCCACCACACCGATCCTGGAGTTCAGCGATACCTGGGCAT 319228 || || |||||||| || | || | | | |||| || || || |||| Sbjct 49294 ACTTACCAGCACCGTTGGGACCAATGACGGCAACACGGGAGGCAAGAGAACACT--GCAT 49237 Query 319229 TCACGTTGTCAAAGATTAGTTT---TTCCGTACCCGGATACTTGAACCCCACACCGCGTA 319285 | | |||||| | | | || || | ||| ||||||| ||| | ||| | Sbjct 49236 AGA-GATGTCAATCAGTTGCTTGCGGTCAGAACCAGGATACTGGAAGTCGACATTCTTCA 49178 Query 319286 GCTTCATGATGGCACGGTCCTTCGAAGTGATACCCTCGAGGAACCCGGGCTCGGGGAACT 319345 |||| ||| ||||| ||||| | ||||||| || | ||| || ||||| ||||| Sbjct 49177 TTTTCAAGATTGCACGTTCCTTAGTCTTGATACCTTCCAAGAAACCAGGCTCAGGGAAAG 49118 Query 319346 TCCACGTGGTCTTCGTCTCGGTAAGGGCGTAGTAACTCGCTGATTCGGGACGCTTCTTCA 319405 | || | | || | | || |||||| || | ||| |||||| | Sbjct 49117 AGAATTTGATTTGAGTAGCTTCCAAGGAATAGTAAGAGGCAGCACGAGGAACCTTCTTGA 49058 Query 319406 CGAACTCGGACAGATTTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAA 319465 |||| ||||||| || ||||| || ||| ||||| || |||||||| || || | Sbjct 49057 CGAATTCGGACAAGTTACCCTTATAACGCTTGAGCTTATAATTGGGTTCGTAGTGAATGA 48998 Query 319466 TAGAGGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGT 319525 | | || ||| || | ||| || |||||||| || ||||| | | | | ||| Sbjct 48997 TGTCCGAACAGACATGATCCAAGAAACCAGAGTCGTGGGAGACAATGATGGAGGTAACAG 48938 Query 319526 CCTTAAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGAC-ACAGAAAGATGGTTG 319584 ||| | | ||||| | |||||| ||||| ||| ||| | || ||| Sbjct 48937 TCTTCAAACCAAGGAGGTAGTTCTCCAACCAGGCAACGTT-GACAACATCCAAGTGATTG 48879 Query 319585 GTCGGCTCGT-CAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAG 319643 || || |||| ||| ||| || | | ||||||| | ||| ||||| |||||||| || Sbjct 48878 GTAGGTTCGTCCAACAAG-AGGATATCAGCGTTCATCAACATAGCACGGGCAAGAGCAAG 48820 Query 319644 TTTCATTTTCCACCCTCCGGAAAG 319667 ||||| ||||| || || || || Sbjct 48819 CTTCATCTTCCAACCACCAGAGAG 48796 >seq106 Length=79482 Score = 116 bits (128), Expect = 8e-21 Identities = 142/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||||||||| ||| | ||| | || ||||| |||||||| || || || | Sbjct 37279 CTCATTGGCATGAATTCTGCCTTGATGTGTCAATACATTGAATTCGTTGCTGATCGTCTC 37220 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| ||||| | ||| || | |||| ||| || || |||| |||||||| Sbjct 37219 ATGGTTGCTCTTGGGTTCGACAAGATTTACATGGCTACTAATCCATTTGACTTTATGGAC 37160 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 | || || || ||||| |||||||||||||| |||||||||||| || ||||| | Sbjct 37159 ATGATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCCGATTATCAACGT 37100 Query 230626 CCTGGTGTGATGAA 230639 ||||||| ||||| Sbjct 37099 GCTGGTGTCATGAA 37086 >seq148 Length=59013 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 318996 GTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGATGATC 319055 |||||| || | ||||||||||| || || || | ||| || ||| | || | || | Sbjct 17981 GTCTTCGCCAGTAGCATAACGCCACTGAATGTATTCGTTTGGCGTCTTATCCAAGTGTTG 18040 Query 319056 CTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTCCA 319115 |||||||| ||||| ||||| || || ||||| |||| ||| | ||| ||||||||||| Sbjct 18041 TTCGATGTGATGGAAGGCATGTTGAGCAACGTAGGCAATACGTAAATTGGGATGCTTCCA 18100 Query 319116 AACACTACC 319124 || |||| Sbjct 18101 TACCGTACC 18109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057816410112800