Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq106 161 1e-34 >seq106 Length=79482 Score = 161 bits (178), Expect = 1e-34 Identities = 432/651 (66%), Gaps = 21/651 (3%) Strand=Plus/Plus Query 16675 TTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTC 16734 ||| |||||| || || ||||| || ||||| || ||||| | ||||| || | || Sbjct 37103 TTGATAATCGGAGACACGCTTTTCAAAGAAGTTGGTCTTGCCTTGGAGAGAGATCATGTC 37162 Query 16735 CATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||| || ||||| ||||||||||| || |||| || | || |||| || | | || Sbjct 37163 CATAAAGTCAAATGGATTAGTAGCCATGTAAATCTTGTCGA--ACCCAAGAGCAACCATG 37220 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 | | ||| || || ||||| || ||||| ||||| || | | ||||| || || ||| Sbjct 37221 AGACGATCAGCAACGAATTCAATGTATTGACACATCAAGGCAGAATTCATGCCAATGAGA 37280 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912 || |||||||| |||||||||||| ||| || || || |||||| || ||| Sbjct 37281 GCAACGGGAAGAGCATCCGTCAAAAATTCTTGTTCAATGCTGACAGCTTCCAAGATGATA 37340 Query 16913 --CTAGCAACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACAT 16966 || | || ||||| || ||||| | || | ||| || |||| | ||||| Sbjct 37341 TCCTTG--ACGCGTTCTTGGCTAGGACGCT-TACG---AAGGTGGGTAAATAAAAGACAA 37394 Query 16967 GCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCG 17026 || || || ||| | || || || | | ||| | ||| || |||||||| ||| Sbjct 37395 GCAAAGTCAGTATGAAGACCTTCATCACGACAGATCAATTCATTGCTGAATGTCAAACCG 37454 Query 17027 GGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATA 17086 |||||| || |||||||| | |||||| || | || || || ||||| ||||| ||| Sbjct 37455 GGCATCAAACCACGTTTCTTGAGCCAAAAGATGGAAGCAAAGGAACCAGAGAAGAAGATA 37514 Query 17087 CCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACG-AAT 17145 || ||||| | ||||| || | | || || || | | || |||| | | ||| Sbjct 37515 CCTTCGACAGCAGCAAAGGCAACAAGGCGCTCAGCAAAGGAACCG--TTTG--AGGAAAT 37570 Query 17146 CCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 ||| || |||| || || ||| ||| || ||| || || || || || ||| Sbjct 37571 CCACTTGAAGGCCCAATCAGCCTTTCTCTTGATACAAGGGATAGTGTCAATAGCAGAAAA 37630 Query 17206 TAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTC 17265 | | ||||| || || || | ||||| || || || | || ||||| |||| Sbjct 37631 GAGCATTTCTTTCTCTTGGTTATCTTTGATATAAGTGTCAATCAAAAGACTGTAAGTTTC 37690 Query 17266 GGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 | ||| ||||| || || || ||||| || || || ||| ||||| Sbjct 37691 TGCGTGAATGTTTTCAATCATGATTTGAAAGCCATAGAAACATTTAGCTTC 37741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517541977180800